Gene Dhaf_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1406 
SymbolgroEL 
ID7258376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1512641 
End bp1514275 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content48% 
IMG OID643561318 
Productchaperonin GroEL 
Protein accessionYP_002457898 
Protein GI219667463 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000472194 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAAAAC AAATCGTTTT CAATGAAGAA GCTCGCCGCG CATTAGAGCG TGGTGTTAAT 
GCCCTGGCTG AGTCTGTCCG GGTAACTCTT GGACCTAAAG GCCGTAATGT GGTTTTGGAC
AAAAAATTCG GCGCTCCTTT GATTACCAAT GATGGTGTGA CTATCGCCCG GGAAATTGAG
CTGGAAGATC CATTCGAGAA TATGGGGGCC CAACTTGTCA AGGAGGTTGC AACCAAAACC
AATGATGTAG CAGGGGATGG AACCACCACT GCAACTGTAT TGGCCCAAGC GATTATCCGT
GAAGGCTTAA AGAATGTAGC TGCCGGTGCT AATCCTATGG GCATCAAGCG AGGCATTGAG
AAGGCTGTTG AATCTGTTGT CGAGGATATT AAAACCAATG CAAAGCCCAT TGAAAGCAAG
GAATCCATCG CTCAAGTAGC TTCTATCTCC GCCGGCGATG ACAACATCGG CGTTCTGATT
TCTGATGCTA TGGAAAAGGT CGGCAAAGAC GGCGTAATCA CCGTAGAAGA AGCTAAAGGA
ATGACCACCG AGCTCAAAGT TGTCGAAGGT ATGCAATTTG ACCGGGGCTA TCTCTCTGCA
TATATGATCA CCGATACTGA TAAGATGGAA GCTATTTTAA ATGATCCTTA CATCTTAATT
ACCGATAAAA AGATTGGCGC TATCGCCGAC ATTCTCCCTG TTCTTGAGAA AGTCGTTCAA
GCCGGCCGTC AACTTCTGAT TATTGCCGAA GATATCGAAG GGGAAGCTTT GGCTACCCTC
ATTCTCAACA AACTCCGCGG AACCTTTACC TGCGTTGCTG TAAAAGCTCC TGGCTTCGGT
GATCGCCGTA AGGCAATGCT GGAAGATATC GCAATCCTCA CCGGTGGTAC CGTCATTACC
GAAGATCTTG GCTTAAAGCT GGAAAACACT ACGATTGATA TGCTGGGCCG TGCTCGTCAA
ATTCGCGTAA CTAAAGAAGA AACCACCATT GTTGAAGGCT CCGGTTCTCA AGATGATATT
AAGAGCCGTG TGGAAGCCAT TAAAAAGCAA ATCGACGAAA CGACTTCTGA TTTCGACCGG
GAAAAACTTC AAGAGCGTTT GGCTAAATTA GCCGGCGGGG TTGCTGTGAT TCAAGTAGGT
GCTGCAACAG AAGTTGAAAT GAAAGAAAAG AAACTCCGCA TTGAAGATGC TTTAGCTGCA
ACCCGTGCAG CAGTTGAAGA AGGTATCGTA GCCGGTGGTG GCTGCGCGTT AGTGGATGCT
GCTAAAGCGC TTGACAGCCT TAAGCTGACC GGAGACGAAA AGACCGGTGT AGCTATTGTA
TGCCGTGCTT TGGAGGAACC TCTCCGTCAA ATTGCCAATA ATGCAGGATT TGAAGGCTCC
ATCGTTGTGG AGAAGGTTCG CAATGGCGGC CGTGGGGTAG GATTCAACGC TCTGACCGAA
GCATATGAAG ATATGATTGC AGCCGGTATC GTTGACCCCG CTAAAGTGAC ACGTTCTGCC
CTGCAGAATG CAGCTTCCAT CGCTGCTATG CTCCTTACTA CCGAGTGCTT AGTTTCCGAT
ATCCCATCAA AGGATAATGG TGCGGCTGCT ATGGCTGGTA TGGGCGGCAT GGGTGGAATG
GGCGGCATGA TGTAA
 
Protein sequence
MAKQIVFNEE ARRALERGVN ALAESVRVTL GPKGRNVVLD KKFGAPLITN DGVTIAREIE 
LEDPFENMGA QLVKEVATKT NDVAGDGTTT ATVLAQAIIR EGLKNVAAGA NPMGIKRGIE
KAVESVVEDI KTNAKPIESK ESIAQVASIS AGDDNIGVLI SDAMEKVGKD GVITVEEAKG
MTTELKVVEG MQFDRGYLSA YMITDTDKME AILNDPYILI TDKKIGAIAD ILPVLEKVVQ
AGRQLLIIAE DIEGEALATL ILNKLRGTFT CVAVKAPGFG DRRKAMLEDI AILTGGTVIT
EDLGLKLENT TIDMLGRARQ IRVTKEETTI VEGSGSQDDI KSRVEAIKKQ IDETTSDFDR
EKLQERLAKL AGGVAVIQVG AATEVEMKEK KLRIEDALAA TRAAVEEGIV AGGGCALVDA
AKALDSLKLT GDEKTGVAIV CRALEEPLRQ IANNAGFEGS IVVEKVRNGG RGVGFNALTE
AYEDMIAAGI VDPAKVTRSA LQNAASIAAM LLTTECLVSD IPSKDNGAAA MAGMGGMGGM
GGMM