Gene Dhaf_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1370 
Symbol 
ID7258340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1477433 
End bp1478131 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content51% 
IMG OID643561282 
ProductABC transporter related 
Protein accessionYP_002457862 
Protein GI219667427 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000531133 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAA TCAAGGTCGA TCATGTAGCA AAAATCTATC AAGGCGGCGA GGGAACAGTC 
TATGCCCTGA AAGATACGAA TCTCCAGGTT CTTCAAGGTC AGTTTCTGGC TTTGCTGGGA
CCTTCCGGCT CAGGGAAGAG CACCCTGCTC AGCATCCTCG GTGCCTTGAA TCCGCCCACA
GAGGGTAAGG TCTTCATCGA TGATATTGAT ATCTATGGGC TGGATGAAGA GCGCAGAGCT
GATTTCCGCC ACGAGTATAT TGGCTTTGTC TTTCAGCAAT ATCAGTTGAT ACCCTATCTC
ACCGCCCTGG AAAATGTGAT GCTCCCTTTA GCGATCACCC GGCACTCTGA TCGAACTCAG
CGTGAGATGG CTCAAAAAGT TCTGGAAAAG GTGGGGCTGG GCAGTAAGTC CCTGCGCCTG
CCTAACCAGC TTTCCGGTGG CGAGCAAAAC CGGGTGGCCA TTGCCCGGGC CATCGTCAAT
AATCCAGTGA TTCTGTTCGC CGATGAACCA ACAGGAAGCC TTGACACCAA GACGGCCAAG
GAAATTCTGG AACTCTTCCA AGCCTTGAAT AAAGAGGGGC AGACGATCAT TATGGTGACC
CATAATCTGG AGAATCTTGC CTATGTCTCC CATGCGGTGC AGATCCGGGA TGGAATTATT
GAAAAAGCTC CTCAGCCTGT GGTCGGTGGT GTGATATGA
 
Protein sequence
MSLIKVDHVA KIYQGGEGTV YALKDTNLQV LQGQFLALLG PSGSGKSTLL SILGALNPPT 
EGKVFIDDID IYGLDEERRA DFRHEYIGFV FQQYQLIPYL TALENVMLPL AITRHSDRTQ
REMAQKVLEK VGLGSKSLRL PNQLSGGEQN RVAIARAIVN NPVILFADEP TGSLDTKTAK
EILELFQALN KEGQTIIMVT HNLENLAYVS HAVQIRDGII EKAPQPVVGG VI