| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1361 |
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| Symbol | |
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| ID | 7258331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 1468570 |
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| End bp | 1470804 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643561273 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002457853 |
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| Protein GI | 219667418 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGATG AACTATTTGA ATCCTTTCCT TTTGGGATAA TCCGTATAGA CTCCACCAAC
AAAATACAGC GGATGAATCA TTATGCCAAA CAACTGACTC ATGCTCTGGA TCCGGAATCT
TTAGAGACCC TTCTCACCTT AAAACCGAAA AATGATATTA CCACATGGTC TGTGGCCAAT
CATCAGATTG CTTTAAATGT CGAACTCTTT ATGGTAAGCG GCGACTCCAA CCGCCTGCTT
CTGCTTGGGT TGGAACCGAA TTTTACATCT GCACTTCCTC CCCAGTTTGA ACGAGCGCTT
GAAGATCTGA CCACAGATCC GGAAGAGATC GTGCTGCGAA TTGTAACTAT GATCAGCGAG
GCAACCTCTT TTGAACGTTT TGATTTGGTA CGGGTGAATC CCCAGCTTCG CAAATACAGC
TATGCTTACT CCATTGGTTT GGAAATAGAG GGCAGTATCT ACGCACCTTA TTCTCAGATT
CGCAAGACCG GTTTAGGCTG GATTTTAGAA ACGGAAGCTC CCCAACTGAG CTCCTCTCTT
CAGCCGGAAG GTTTCTCCTT CAGCGAGGAT CCCATGCTCT ATCGGACAGG ATTTCGTTCC
GCCCTGAGAG TTCCTATCCT CTTTGGTCAC GAGGTAATCG GCGCCATCTT ATTGGGCGGC
ACCAAAGCCT TGCAATTTGA GATAGAAGAT GCCTATTTAA TTAGCCAGAT TTCCCGGCAC
TTCAGTCAGG CCTTTTATCA TTCCGGAATA ATCCAGGAAC GCTCTTATCA GGCTATGGCT
ACATCAGCCT TTCTGCACAG CATGGCGGAA AACCTTAAAG ATGATCACAT CCTTGATTTT
CTCAATGACT ATTGCATTCA ATTGCAAATC GCCACTCAGC TGGAAAGCAT TTATCTTTGT
CTCCTTGATC AGACTCACCA ACAGCAAAAA CTCCTCGTTA GCGCAGGCAG AAAATTTCCC
CAGAAAAATG AGTGGAAACC TTTGGACAAG GAAATCGCCG CAATGCTTCA AGCAAAGAGT
ATTGTCTGCT ATAGCTTAGT CCATACCTCA ATCCAAAATA CGGACGAACT TTTGAACCAG
GGATTTACCT CTACTCTTTA CGCTCCCATC GAACATCGGG AAACTATTGT CGCCGCGCTG
GTGGCCGCCG CAATGGACGA AAAAGCTTCT TCCCCCTATA TGTCCGGATT ATTCAAAGTA
GCTACAGAGC AACTTAGCTC TGTAGTAGCC CGCCTCCCAA ACGCTCCCGG TGCTGTCCCT
GAACCAAACT CTTCTCGGCA GCTCCCTAAG CCAACAAGAA AAGATCGTCT ACAAGATCAA
GAGACTTCCG GATTTTCACG AATTATCGGC AGCTCCAAAA TCATGCAGGA CACAATCCAG
AACGCTGCCC GAGTTGCTCA ATATGACTTC CCCATCTTGA TTACCGGTGA AACAGGAACC
GGGAAAGAGC TGCTGGCGAA AGCGATTCAT CAATCAAGTC AAGTTGCTCA GGGTCCGTTT
ATTGTGGTTA ATTCGGCAGC TATACCGGCT AATCTTTTAG AATCCGAGCT TTTCGGTTAT
CAGGAGGGGG CCTTTAGCGG CGGAGTGAAA GGCGGCAAGC CCGGAAAAAT CCTGCTGGCC
AATCGAGGAA CTTTGTTTCT GGATGAGATT GGTGAGCTTT CTCCGGAACT GCAAGCAAAG
CTCTTAAGAG TTATCCAGGA ACAAGAAATA GAACCTTTAG GCGCTATCAA GCCCATTCCG
ATTAAGGTCC GCATTCTCTC CGCAACCCAT CGCGACCTTA GTTCGATGGT TGAGCAAGGA
GAATTCCGGG AAGATTTATT ATATCGACTT AATTCTATTG AGATCAAAAT CCCTCCCTTA
CGAGAGCGGG GGCAGGATAT TCTGGAATTA GCCGAGCATA TGCTTCAGTT CCTTGCTCAA
AGTCATGATA CTCCGGAAAA AACCCTTTCC CCTGGCGCTC AAGACCTCTT TCTCAAATAC
ACTTGGCCGG GCAATATCCG CCAACTCCAA AATATTATCA ACCGGCTTTA CGTTTTTGCG
GAAGGTTCCA CCATTCATAC TCAGGATCTG CCTCCCGACC TTCGGGTGGC TGAAACGGAC
AAGGGACATT CCGAAAAAGA GGAAATCGCA GGCTTACTTG CAGAGTTTGG AGGAAACAAA
ACCGCTCTGG CACAATATCT GGGGATTACC CGGACCGGTC TTTGGAAAAA GCTAAAACGT
CTAGGACTTC AATAA
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| Protein sequence | MRDELFESFP FGIIRIDSTN KIQRMNHYAK QLTHALDPES LETLLTLKPK NDITTWSVAN
HQIALNVELF MVSGDSNRLL LLGLEPNFTS ALPPQFERAL EDLTTDPEEI VLRIVTMISE
ATSFERFDLV RVNPQLRKYS YAYSIGLEIE GSIYAPYSQI RKTGLGWILE TEAPQLSSSL
QPEGFSFSED PMLYRTGFRS ALRVPILFGH EVIGAILLGG TKALQFEIED AYLISQISRH
FSQAFYHSGI IQERSYQAMA TSAFLHSMAE NLKDDHILDF LNDYCIQLQI ATQLESIYLC
LLDQTHQQQK LLVSAGRKFP QKNEWKPLDK EIAAMLQAKS IVCYSLVHTS IQNTDELLNQ
GFTSTLYAPI EHRETIVAAL VAAAMDEKAS SPYMSGLFKV ATEQLSSVVA RLPNAPGAVP
EPNSSRQLPK PTRKDRLQDQ ETSGFSRIIG SSKIMQDTIQ NAARVAQYDF PILITGETGT
GKELLAKAIH QSSQVAQGPF IVVNSAAIPA NLLESELFGY QEGAFSGGVK GGKPGKILLA
NRGTLFLDEI GELSPELQAK LLRVIQEQEI EPLGAIKPIP IKVRILSATH RDLSSMVEQG
EFREDLLYRL NSIEIKIPPL RERGQDILEL AEHMLQFLAQ SHDTPEKTLS PGAQDLFLKY
TWPGNIRQLQ NIINRLYVFA EGSTIHTQDL PPDLRVAETD KGHSEKEEIA GLLAEFGGNK
TALAQYLGIT RTGLWKKLKR LGLQ
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