Gene Dhaf_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1356 
Symbol 
ID7258326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1464178 
End bp1465281 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content50% 
IMG OID643561268 
ProductABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein 
Protein accessionYP_002457848 
Protein GI219667413 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.459208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAC CGCAAAGAGG CTTGGTATTC CGATTAACCG CAGTGCTTCT TGCAGGAGCG 
CTGCTGGCAG GGAGTCTTAC AGGCTGCGCT TCGAACCAAG GGGCTCCGGC CCAAAGCAGC 
CAAGTCGGGA CAGAACAGCC GCAGCCCGGA GAATCCGCCA ATCTGACCCC GGAGCAATAT 
GAGGCAGCCT ATCAAGCGGA GCCGGCCGCC AAACGGGTGA TTCATATTGG GTACAATGGC 
GGGCTGTGCC AGGCGCCCAT CGCCATTGCT CAAGAAAAAG GCTTTTTCGA GGCGGAAGGA 
CTTAATACGG AGCTGACCCG TGCCGAAGAT ACCCGTGACG CTATTGTGGG CGGGAAGATC 
GATACCTCGG CAGGCATGGT TGCCGGCTGG CTTAAACCCA TCACCAGCGG AGTGGATCTG 
GTATTTACGG TCGGCCTGCA CACCGGCTGC GCCTCGGCCA TTGCCCTGGC TGATTCGCCC 
ATCAATTCCT TTGCGGATGC CAAAGGAAAG GTTGTGGCCA TTAATGGCGG GATCGGCGGT 
ATCTATCATA ACATTGCTTA TCGTCTGATT GCCCATGATG GGTACGTTCC AGGAGATTTT 
ACTTGGAAGG ACTTCCCTGC CGAACAGGCT CTTCAGGTAT TGCAGAAAGG TGAAGCTTCC 
ATAGCCGTAC TTGCGGATCA ACTAGCTGAG AAATGGGTCC AGGAAGGACT GGTGAAAAGA 
ATTCGCTCCA CTACTCTGGA TGAAGATTTT AAGAATGAAA CCTGCTGCGT ACTGGGTATC 
TCAGGAGATT TTATCCGTGA GAATCCTGTA ACTGCCGAAA AAATTACCAG AGCAATTTAC 
AAGGCCAGTC TGTGGGTGGA GGAAAATAAA GAAGAAACAG CTCAGATTCT CCTGGATAAT 
AAGCATATCA GTGGCAGTGT TGATTATGCC ATGGATTTGC TTAAGCTCTA TAATTATAAC 
GTCACCAACG ATGGCACGGA AAAATCCATC TATGATTCTA TCGACGAATA TAAGGCATTG 
GGTGTCATCG ATCAGAATCT TGATGCTGAA ACCTTTAAGA AACAAGTCTG GCATCGGTTT 
GAGCTGGAAG ATCTGAAGAA TTAA
 
Protein sequence
MRKPQRGLVF RLTAVLLAGA LLAGSLTGCA SNQGAPAQSS QVGTEQPQPG ESANLTPEQY 
EAAYQAEPAA KRVIHIGYNG GLCQAPIAIA QEKGFFEAEG LNTELTRAED TRDAIVGGKI 
DTSAGMVAGW LKPITSGVDL VFTVGLHTGC ASAIALADSP INSFADAKGK VVAINGGIGG 
IYHNIAYRLI AHDGYVPGDF TWKDFPAEQA LQVLQKGEAS IAVLADQLAE KWVQEGLVKR 
IRSTTLDEDF KNETCCVLGI SGDFIRENPV TAEKITRAIY KASLWVEENK EETAQILLDN 
KHISGSVDYA MDLLKLYNYN VTNDGTEKSI YDSIDEYKAL GVIDQNLDAE TFKKQVWHRF 
ELEDLKN