| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1325 |
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| Symbol | |
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| ID | 7258295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 1430820 |
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| End bp | 1432178 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643561237 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_002457817 |
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| Protein GI | 219667382 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00135796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACC AAGAAAACGG TATGCACCGC GGTCTAAAAA ACCGGCATAT CCAAATGATC
GCTCTAGGAG GAGCGATTGG CACAGGTCTT TTTTACGGTT CTGCTGCAAC GATTGAGCTG
GCCGGTCCCG CAATCACATT TTCCTATCTT ATTGGTGGAT TAGTTATCTT TTTCATCATG
AGAATGTTAG GGGAAATGGC CGTCGATGAA CCTGTTTCCG GATCCTTCAG TCATTTTGCC
TATAAGTATT GGGGGGAATT TCCCGGATTT CTTTCTGGTT GGAATTATTG GTTCAATTAT
ATCGTCGTAA GCATGGCTGA ATTGACTGCC GTCGGGATCT ATATCAATTT CTGGTTCCCC
GACATCCCTC ACTGGCTAAC TGCTCTGGTC TGCCTCGTCC TCGTTACTCT GCTTAACCTT
ATTAGTGTCG GCACCTTTGG TGAATTTGAA TTCTGGTTTG CGATTGTTAA AGTTGTGGCA
ATTATCGGCA TGATTGTCTT CGGATTATTT CTTATCTTCT CTGGAATCAA CGGTGAAGCT
ACAGGATTTG ATAACCTTTG GATTCACGGC GGGTTTATTC CCAATGGCAT GATTGGTATT
TTGTTCTCTT TGGTACCGGT CATGTTCAGC TTTGGCGGAA TTGAGCTCAT CGGTATCACG
GCCGGTGAAG CTGATAACCC CCAAAAATCC ATTCCTAAAG CCATCAACCA GGTTATGTGG
AGAATTCTTA TTTTCTATGT GGGAGCCTTA TCTGTCCTGA TGGTTCTTTA TCCCTGGAAT
CAGGTGGGTG CTGACGGAAG TCCCTTCGTT ATGATCTTCT CTAAAATTGG CATTCCTGCG
GCTGCAACCC TCCTCAATAT CGTTGTTCTA ACCGCTGCCC TTTCCGTGTA CAACAGCGGC
GTCTACAGCA ATGGACGTAT GCTGTACAGT CTGGCTATGC AAGGCAATGC TCCGAAGCTT
TTTGCCAAAT TAAACAAACG GGGGATTCCT GTCGCCGGAG TGCTGGTCTC TTCCGGAATT
ACCTTAGTCG GTGTTATTCT CAACTTCCTG TTGCCCGGCA AAATCTTTAC GTATCTCATG
GCTGTGGCGA TCATTGCCGC AGTTATTACC TGGACTACGA TTATTATCGT AAACCTTAAA
TTCCGCAAGG CAAAAATCGC TCAGGGTGAA GGCGATGCTC TTCACTTCAA GACCCCTCTA
CACCCTTACA CAAACTATTT TTGCGCCGCC TTCCTTGTGA TGATTGTCAT CCTTATGGCC
TTTACTGAAA GCATGAAAAT GGCTGTATTG GTTCTTCCCA TCTGGTTGCT TATCCTCTGG
ATTAGCTTCA AAATCAAAAA ATCAAGAGAA AGTAAATAA
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| Protein sequence | MSNQENGMHR GLKNRHIQMI ALGGAIGTGL FYGSAATIEL AGPAITFSYL IGGLVIFFIM
RMLGEMAVDE PVSGSFSHFA YKYWGEFPGF LSGWNYWFNY IVVSMAELTA VGIYINFWFP
DIPHWLTALV CLVLVTLLNL ISVGTFGEFE FWFAIVKVVA IIGMIVFGLF LIFSGINGEA
TGFDNLWIHG GFIPNGMIGI LFSLVPVMFS FGGIELIGIT AGEADNPQKS IPKAINQVMW
RILIFYVGAL SVLMVLYPWN QVGADGSPFV MIFSKIGIPA AATLLNIVVL TAALSVYNSG
VYSNGRMLYS LAMQGNAPKL FAKLNKRGIP VAGVLVSSGI TLVGVILNFL LPGKIFTYLM
AVAIIAAVIT WTTIIIVNLK FRKAKIAQGE GDALHFKTPL HPYTNYFCAA FLVMIVILMA
FTESMKMAVL VLPIWLLILW ISFKIKKSRE SK
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