| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1318 |
|---|
| Symbol | |
|---|
| ID | 7258288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1422383 |
|---|
| End bp | 1423258 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643561230 |
|---|
| Product | 6-phosphogluconate dehydrogenase NAD-binding |
|---|
| Protein accession | YP_002457810 |
|---|
| Protein GI | 219667375 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.676438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA GTAATCTTAA AATCGGTTTT GTAGGTACTG GAGTTATGGG CCGCAGTATG
GTCAAGAATC TCCTGAAGGA TGGGTATTCT GTAGCGGTTT ACAACCGGAC GAAAAGCAGT
GCTGAAGAGC TTTTTGCCTT AGGGGTGCAG TGGGTGGATT CGGTAGCCGG GCTTGCCAGG
CTGTCCGATG TGGTGATCAC TATGGTGGGC TATCCCAAGG ATGTGGAAGA AGTCTACTTA
AGTGAAGAGG GGCTGATACC TAATGCCAAG CCCGGATCTG TTCTTATTGA TATGACAACT
TCCAGCCCCC TTTTGGCCCA AAGGATTGCC TTAGCAGGGA AAGCCGGTGG AATTGATGTT
TTGGATGCAC CCGTATCCGG CGGGGATGTG GGAGCCCAAA ACGGTACTTT GGTCATCATG
GTAGGGGGAG AAGAAGGGGT ATTTGACAAG GTCAAGCCGA TCTTTGAAGC GATGGGTAAA
AATATAATCC TGCAGGGACC GGCCGGTGCA GGACAGTATA CGAAAATGGC CAACCAAATC
ACCGTTGCGG GGGGAATGAT TGGGGTTTGT GAAGCTATAG CTTACGCCCA AAAGGCCGGT
TTGGATCCCA GCCGGGTCCT CGACAGCATC GCGGGAGGGG CGGCAGGCAG CTGGTCCCTG
AGCAACCTTG GACCAAGGAT GATAGCCGGA AACTTCGAAC CAGGTTTTTA TGTGAAGCAT
TTTATCAAGG ATATGAACAT TGCTTTAGAG TCGGCTAAAG AGATGGGGTT GATGACCCCC
GGCCTTGAGC TGGCAAAATC ACTTTATGAA CAACTGGCTG CCGAAGGAGA GGAAAACAGC
GGTACCCATG CCTTGTATAA ATTATATATG AAGTGA
|
|---|
| Protein sequence | MSKSNLKIGF VGTGVMGRSM VKNLLKDGYS VAVYNRTKSS AEELFALGVQ WVDSVAGLAR
LSDVVITMVG YPKDVEEVYL SEEGLIPNAK PGSVLIDMTT SSPLLAQRIA LAGKAGGIDV
LDAPVSGGDV GAQNGTLVIM VGGEEGVFDK VKPIFEAMGK NIILQGPAGA GQYTKMANQI
TVAGGMIGVC EAIAYAQKAG LDPSRVLDSI AGGAAGSWSL SNLGPRMIAG NFEPGFYVKH
FIKDMNIALE SAKEMGLMTP GLELAKSLYE QLAAEGEENS GTHALYKLYM K
|
|---|
| |