Gene Dhaf_1312 details

Gene Information

• Locus tag: Dhaf_1312
• ID: 7258282
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 1412678
• End bp: 1414447
• Gene Length: 1770 bp
• Protein Length: 589 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 643561224
• Product: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD
• Protein accession: YP_002457804
• Protein GI: 219667369
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components
• TIGRFAM ID: [TIGR02857] thiol reductant ABC exporter, CydD subunit

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000000743018
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGATA AGCGTTTGAT GCGGGAAGGC AAACATGTTA AAAGATACCT TTTAGGGACC 
ATAGCCCTTG GCCTGGGAAT AGCTTTGCTG GCGATTATTC AGGCCTGGCT CCTCTCCCAG 
GTGATTGCCC AAGTTTTTCT GGAAGACGCA CCTTTTGGCC AAGTGCAAGG ATATCTTCTG 
GCCATTTTGG GTGTCATCGG TGTACGGGGG ATTTTCCAGT ATTGCAGTGA AGTAACTGCC 
CGTGAGGCGG CCATCCGGGT AAAGGAAAGG GTAAGGGTGC GGTTTCTGCA CAAGATCCTG 
GCGCTGGGGC CTGTGTATGC CCGGGGGGAG CGGGGAGGGG AACTGCTCAA CACAGCGGTA 
GAGGGAATTG AAGCCTTGGA TGATTATTTT GCCCGCTATG TTCCCCAACT CATTTTAGCT 
GTTTTAGTAC CGATGCTTAC GTTAGCTTTT GTCCTGCCTA AGGATTTTCA ATCTGCCCTT 
GTCTTAATCA TAACCGGCCC CCTCATTCCT TTCTTCATGA TCTTGATTGG CAAACTTGCT 
GAGAAAAAGT CTTTACGGCA ATGGCAAAGC TTAAGCCGTA TGAGCGCTCA TTTTCTTGAT 
ATGCTTCAAG GCTTAACCAC CCTGAAGCTG TTCGGGCGGA GTAAAGACCA AGCCACAGTG 
ATCAGCCGGG TCAGCGAGGC CTTTCGGAAG AGTACCATGA GCGTCATGAA AGTAGCTTTT 
TTATCGGCTT TTGTCCTGGA GTTTATGGGG ATGATCAGCA CCGCAATCAT TGCCGTAACC 
TTGGGCCTTC GTTTGATTAA TGGCACGGTT CCCTATGCTG AGGCGCTTTT CATTCTGATC 
TTAGCTCCGG AGTTTTATTT GCCCTTAAGG ACTCTTGGTT TGTCTTTTCA TGCACGACTC 
TCCGGGAGCA ATGCTGCTCA GCGCATTTTC GAAGTCCTTG AGCTAGAGAA CCAGCTGGAA 
TCTGAGTTGA ATGGGGTGGA ATTGGGCGGA GGGGCGGAGG AGCCCGGTCA TTTGTTCAGG 
GGAGAGCAAG GCGCGCCTTG GCTTACATTT AAACAGGTGG ACCTATGCTA TGAGCAAGAG 
GGAGAAAGAG TTTTAAAGGA TATTAACTTT ACCCTCCGCC TTGGTGAACG GGTGGCTTTG 
ATTGGACCCA GTGGCGCGGG AAAAAGCTCC CTTCTGCAGA TTCTGCTTAG GTTTGTAGAA 
CCGACACAAG GAAAGGTGCT GATTAACGAT ACGGTATTAA ACAGGATCCC GGCGGCAGCT 
TGGCGGGAGA TGATTTCTTA CGTTCCCCAG AAACCTTATC TCTTTGCCGG GTCGATTATG 
GAGAATATTC GCTTCGGCAA CCCCGGGGCA GCTTGGGCAG ACGTGGTAAG GGCTGCTCAA 
CTGGCCATGG CCCATGAGTT TATCAGCGAA CTTCCCCAAG GCTATGATAC CCTTGTGGGT 
GAGGGAGGAG CCCGTTTAAG CGGGGGGCAG GCGCAGCGCA TAGCCATCAG CCGGGCCTTT 
CTTAAGGATG CGCCGCTGCT GTTGCTGGAC GAAGTGACCA GCGGCTTGGA TAACGAAAAT 
GAAAAGGATT TGCTGATAGC CTTGGAGGGC CTTTGTCAGG ACAGGACCGT AATCTTTACC 
ACCCATCGCA TGAGGACGAC GATTGAGGCG GATCGGATCC TGGTACTTGA TAAGGGGAGG 
ATTATTGAGG AGGGCTCTCC ACAGACCTTA CTCAATAATC AAGGGCTCTA CACCCATTTC 
GTAAGCACCT ATGGGAGGGA AGAGGAATGA 

 

Protein sequence

MLDKRLMREG KHVKRYLLGT IALGLGIALL AIIQAWLLSQ VIAQVFLEDA PFGQVQGYLL 
AILGVIGVRG IFQYCSEVTA REAAIRVKER VRVRFLHKIL ALGPVYARGE RGGELLNTAV 
EGIEALDDYF ARYVPQLILA VLVPMLTLAF VLPKDFQSAL VLIITGPLIP FFMILIGKLA 
EKKSLRQWQS LSRMSAHFLD MLQGLTTLKL FGRSKDQATV ISRVSEAFRK STMSVMKVAF 
LSAFVLEFMG MISTAIIAVT LGLRLINGTV PYAEALFILI LAPEFYLPLR TLGLSFHARL 
SGSNAAQRIF EVLELENQLE SELNGVELGG GAEEPGHLFR GEQGAPWLTF KQVDLCYEQE 
GERVLKDINF TLRLGERVAL IGPSGAGKSS LLQILLRFVE PTQGKVLIND TVLNRIPAAA 
WREMISYVPQ KPYLFAGSIM ENIRFGNPGA AWADVVRAAQ LAMAHEFISE LPQGYDTLVG 
EGGARLSGGQ AQRIAISRAF LKDAPLLLLD EVTSGLDNEN EKDLLIALEG LCQDRTVIFT 
THRMRTTIEA DRILVLDKGR IIEEGSPQTL LNNQGLYTHF VSTYGREEE