| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1309 |
|---|
| Symbol | |
|---|
| ID | 7258279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1408787 |
|---|
| End bp | 1409923 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643561221 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_002457801 |
|---|
| Protein GI | 219667366 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase
[TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000234222 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGGCG GAAATCTGTT GGACGCCTCG GCACAGTATG GGAGACAGAA CTTTATTGAT
TTGTCCGCTA ATATTAATCC ATTTGGCCCT CCTCAGGGAG TTTGGGAAGC CCTTCAAAAA
GGAGTTGCCA ATATAATCCA TTACCCTGAT CCGAATTATC GGCGCCTCCG GGGGAAGATG
GCAGAATATT ACGCTCTTAA CGCTGAAGAG ATACTTCTGG GCAATGGAGC CGGTGAGTTG
ATTTTTCTGA TTCTCCATGG TCTCCGGCCC CGCAAAGTGC TGATACCCCA GCCGGCCTTT
AGTGAATATG AACGGGCGGC CCTGGCCTGC GGCGCAGAGG TAAATAAGCT TATCCTTGGC
GTAAAAGGGT GGGGGGAGCT TTCTTTTCAG AACGAAGAAA GTCATAGAGA ATGGGAGCAA
GCCCTCGCGG AAAATGAGCT GGTGTTTATC AATTCTCCTC ATAATCCTAC CGGCAGTGCC
CTGTCGAAGC AGCAGTTTGA AGTGATTCTC AACCTGGCCT TAAAACATCA GACTTGGGTC
GTTTTAGACG AATCTTTTGT TGACTTTCTG GAGGATGAGA GCCGCTGGTC AGGCAAAGGG
TATTTACGAA GGTATCCCAA TCTGTTGGTG TTATATTCTT TAACCAAATT CTATGCTATT
CCGGGGCTGC GCCTGGGGGC AGTTTTTGGG GCAGCCAAAC TACTTGGCCG TCTGCAGGAT
CAACGGGACC CTTGGGCTGT TAACAGTTTG GCGGAAGAAG CCGGGCTGGC TGCTTTGGCT
GATGCAGAGT ATGGGAAGCG GGTAAGGCGG CTCTTGCAGG AAAGCAAAGA GTCATTTTAC
CGGAGTTTTG CTGAAGGGCG CAAGGGAAAG AAGTATTGGG GCTTGCGTCT ATATTCCAGT
AAGGTTAATT TTGCCCTGAT TCAAGTCCTA GAAGCGGAAG ATTCAGGTAC CGATCGGGAC
GATGCCGGCA AAGGGAAAAA AAACCTTATT CAGGAGTTGG GGAAACAGGG AATTCTGGTC
AGGGATTGCG GAAACTTTGC GGGGCTGGAG GGAAACTATA TAAGGGTGGC CATCAAAGAT
CAGGAAAGTA TGAACTCATT ATTAGCAGGT TTTAAGATGC TGGATAACTT ATGTTAA
|
|---|
| Protein sequence | MHGGNLLDAS AQYGRQNFID LSANINPFGP PQGVWEALQK GVANIIHYPD PNYRRLRGKM
AEYYALNAEE ILLGNGAGEL IFLILHGLRP RKVLIPQPAF SEYERAALAC GAEVNKLILG
VKGWGELSFQ NEESHREWEQ ALAENELVFI NSPHNPTGSA LSKQQFEVIL NLALKHQTWV
VLDESFVDFL EDESRWSGKG YLRRYPNLLV LYSLTKFYAI PGLRLGAVFG AAKLLGRLQD
QRDPWAVNSL AEEAGLAALA DAEYGKRVRR LLQESKESFY RSFAEGRKGK KYWGLRLYSS
KVNFALIQVL EAEDSGTDRD DAGKGKKNLI QELGKQGILV RDCGNFAGLE GNYIRVAIKD
QESMNSLLAG FKMLDNLC
|
|---|
| |