| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1280 |
|---|
| Symbol | |
|---|
| ID | 7258250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1378472 |
|---|
| End bp | 1379050 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643561192 |
|---|
| Product | dimethylsulfoxide reductase, chain B |
|---|
| Protein accession | YP_002457772 |
|---|
| Protein GI | 219667337 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0157517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAAT ATGGATTCTA CTTTGATATG ACCGCTTGTG GCGGATGCAA AACCTGCCAA
ATTGCTTGTA ACGATCGCAA TGACCTGAAG CCCGGAACTT TGTTCAGAAG AGTTAAAGGC
TTTGAAGGCG GGAAGTTCCC CACGCCTTGG ATTTACTACC TTTCCATCAC CTGCAACCAC
TGCAAAGAAC CTAAATGTGT GGAAGGCTGC CCAACTCAGG CTATGCATAA GCTGGAGAAT
GGGATTGTCG CCCACGATAA AAGCAAATGC ATCGGCTGCC GTTATTGCAC TTGGAGCTGC
CCTTATGGGG TTCCTCAATT TATCGAAGAA ACCGGCCAGG TCAGCAAATG CGATATGTGC
CAAAACTTAG TGGAAAAAGG GGAGAACCCT GCCTGCGTCG ATGCCTGCAC CATGAGAGCT
ATCAAATGGG GAGAGCTTGA CGAACTGCGG GCAAAATATG GGGCGGATGC CGTAAGTGAC
TTGCCGGTGC TGCCCAGCTC TGCCAAAACA ACCCCCTCCG TTCTGATCAA ACCCAAAACC
GTTGCTCTCA ATAAAGAATT TATAGTGAAG GAGGACTGA
|
|---|
| Protein sequence | MAQYGFYFDM TACGGCKTCQ IACNDRNDLK PGTLFRRVKG FEGGKFPTPW IYYLSITCNH
CKEPKCVEGC PTQAMHKLEN GIVAHDKSKC IGCRYCTWSC PYGVPQFIEE TGQVSKCDMC
QNLVEKGENP ACVDACTMRA IKWGELDELR AKYGADAVSD LPVLPSSAKT TPSVLIKPKT
VALNKEFIVK ED
|
|---|
| |