| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1279 |
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| Symbol | |
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| ID | 7258249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1375875 |
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| End bp | 1378472 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643561191 |
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| Product | Trimethylamine-N-oxide reductase (cytochrome c) |
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| Protein accession | YP_002457771 |
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| Protein GI | 219667336 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0761617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAGT TCTTTGATAA GATCAATGAA ATGACAATCA GCCGCAGAAA CTTCATTAAA
GCCAGTACCG CTGCTGCTGC CAGCTTATCT TTAGTGGGCT GTGGCAATAC TCTGACCACC
ACCAATGCGG GTCAGGCTGC CAATGAAGAA GGAACATGGA TTACAGCGGC TTGCTGGCAT
AACTGCGGCG GACGCTGCCT GAACAAGGCC TTGGTGGTGG ACGGCGTCGT TGTCCGTCAA
AAAACCGATG ACACCCATCC GGACAGCCCG GATTATCCAC AGCAAAGGGG CTGCGCCAGA
GGGAGATCCC AGCGCCAGCA GATTTTTGGC GCCGATCGCT TAAGATACCC CATGAAACGC
AAAAATTGGA ACCCAGGGGA CGGCGGCAAG AGAGAGCTCC GGGGTAAAGA TGAGTGGGTA
AGAATTTCCT GGGAAGAAGC CCTGGATCAT GTCGCCGCCG AATTAAAACG TGTCAAAGAA
ACCTATGGCA ATAAAGCCAT TCTCGCTAAA AGCACGGGTC CGGCTCTTAA TGCTTACGGC
GGAGCTATGA CCTACTGGGG TTGTACTTCA GATGGAGCAT GGCCAAAACC TCAGCAATTT
ATGAACGGCG GCCGTTCCAG AGGCTCCAAC GACCGCTTGG ATCTGAGAAA CTCCAAACTC
ATTGTCTTGT GGGGAGCTAA TCCCGTATGG AGCAGTGGCG GCAATCCTGC CTATAACTTT
AAACAGGCCA AAGAAGCAGG GGCCAAATTC ATTATCGTCG ATCCACTCTA TAACGACACA
GCCCAACTCC TTGCCGATCA GTGGATTCCG GTAAGACCTG GAACCGATAC GGCCTTATTG
TTGGGAATGG CCCATTATAT GATCACCAAT AACCTCCATG ATCAGGAATT CCTCGATAAA
TACTGCGTGG GCTTTGATGC CGAGCATATG CCGGAAGGTG CTGATCCGAA AGAGAACTTT
AAGGATTATG TTCTGGGAAC CTATGACGGC ACACCCAAAA CTCCGGAATG GGCTTCCGAG
CATTGCGGAA CCGATCCGGA TCTGATCCGC TCTTTCGCTC ATGAGGTTGC CGTGACGAAA
CCCATGACCT TCACCAGTTC CTCGGCAGCG GCCAGAACCT CCGTAGGGGA ACAATTCTGC
CAGGCCTTCC TGACCGTGGG CTGGATGACC GGAAATGTAG GGAAACCAGG GGCCAGCGTC
TGCTCCAATA ACCGTCATAA TACCCAAAGC TATGGCGGAC CGGCTCTTGT CAAAGCGGGA
GGTGCCGGCG GCAAATCTCC GGCTAATCCT GTCTATAAAG AGCCTACCTT CCCCGGCCCC
GATCCTTTTA AAACAGACTG GCATGGCATC GTTATCGACG AAGCCTGGGA CGCGGTGATC
AATGGGGAGT ACACTGCAGG AGTAAGAGGC AAACAGCCCT GCGATATCCG CATGATTTGG
AATATCGGCT CGGGCAATGT GCTCAACCAG AATACCGATA TCATGAAAGG AATCGAAGCC
TTCCGCAAAG TTGAATTTGT GGTAACATCG GCCCATTTCC TTACCGCCAC GGCCCAATAT
GCAGATATCG TGCTTCCGGC TACCACCGAG TGGGAAAGAC TGGGCGGTTT CTTAACGGGC
AACCCGGAAA TGATCATTTT CTACAGCCAA ATCACCCAAC CCATGTTTGA GGCCAAAGAT
GATGATTGGA TGTATGCCGA GATCGGCAAG CGGCTGGGCT TGGATCCTGC TGATTTTGAT
CCCCTTTCCC CTGAGCAGAA GCTCTTCAAT ATGGTGGCCG GCTGCACCGT GATGAAGGAA
GACGGCTCAG GCTATGAGAA GCTGGTGACC ATTACCGCTG AGGATATTGC CGCCCTGGGA
GTGAAAGGGA CTCCCCAGGA AGGCCGCATC AGCTATCAAG AATTTAAGGA ACAAGGAGTC
TATCAGGTGC CCCGTTCCCC TGGAGACCAA TACACCTATA TTGACTATAA AGACTTCATT
GAGGACCCTG AAAAGAACCC GCTGGGCACC GAAAGCGGCA AATTCCAAAT CCACAGCCAA
GGCTTGGCCG ATACGATCAA TGCTTATGGC TGGAACACCT TAGCTCCCAT CCCTAAGTAT
CAATATGTTA CTGAAGGTTA TGAAGAGACC TTCGCCAACT TTGAGAAGAA AGAGAAGAGC
GGCTATCCGC TCCAGCTCAC CACGATCCAC TATGCACGCC GCAGCCATTC CACCTTGGAT
AATATCTCCT GGCTCAGAGA GGCGTTCCAA AACAGACTTT ATATTCATCC TGCCGATGCT
GCCGCCAGAG GAATCGCTAA AAATGATATC GTGAAAATCA GCAGCCGTCA TGGCCAAGTG
ATCCGGCCTG TGTATATCAC AGAGAGAATC ATGCCGGGAA CCCTTACTTT AGGTCAGGGC
GCTTGGGCGG AAGTGGACGA CGAAACCGGT ATCTGTAAGG CAGGCGCCAC CAATGTACTG
AATGGAGGAC TTCCTACCGG ACAAGGGGTG CAGGCATACA ACACATGTAA TGTTCAAGTC
GAGAAGTATG ACAGCAAACT GGAAACCGAC TATTTATGGC CCAAACGGAT TGTTGCTGCA
CAAGGGGGGA ATAAATAA
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| Protein sequence | MTKFFDKINE MTISRRNFIK ASTAAAASLS LVGCGNTLTT TNAGQAANEE GTWITAACWH
NCGGRCLNKA LVVDGVVVRQ KTDDTHPDSP DYPQQRGCAR GRSQRQQIFG ADRLRYPMKR
KNWNPGDGGK RELRGKDEWV RISWEEALDH VAAELKRVKE TYGNKAILAK STGPALNAYG
GAMTYWGCTS DGAWPKPQQF MNGGRSRGSN DRLDLRNSKL IVLWGANPVW SSGGNPAYNF
KQAKEAGAKF IIVDPLYNDT AQLLADQWIP VRPGTDTALL LGMAHYMITN NLHDQEFLDK
YCVGFDAEHM PEGADPKENF KDYVLGTYDG TPKTPEWASE HCGTDPDLIR SFAHEVAVTK
PMTFTSSSAA ARTSVGEQFC QAFLTVGWMT GNVGKPGASV CSNNRHNTQS YGGPALVKAG
GAGGKSPANP VYKEPTFPGP DPFKTDWHGI VIDEAWDAVI NGEYTAGVRG KQPCDIRMIW
NIGSGNVLNQ NTDIMKGIEA FRKVEFVVTS AHFLTATAQY ADIVLPATTE WERLGGFLTG
NPEMIIFYSQ ITQPMFEAKD DDWMYAEIGK RLGLDPADFD PLSPEQKLFN MVAGCTVMKE
DGSGYEKLVT ITAEDIAALG VKGTPQEGRI SYQEFKEQGV YQVPRSPGDQ YTYIDYKDFI
EDPEKNPLGT ESGKFQIHSQ GLADTINAYG WNTLAPIPKY QYVTEGYEET FANFEKKEKS
GYPLQLTTIH YARRSHSTLD NISWLREAFQ NRLYIHPADA AARGIAKNDI VKISSRHGQV
IRPVYITERI MPGTLTLGQG AWAEVDDETG ICKAGATNVL NGGLPTGQGV QAYNTCNVQV
EKYDSKLETD YLWPKRIVAA QGGNK
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