Gene Dhaf_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1272 
Symbol 
ID7258242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1369427 
End bp1370425 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content52% 
IMG OID643561185 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002457765 
Protein GI219667330 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.486831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGA GAAATAAGGT CTTACAGAAG CTAATCGTGC CATCCTTCTT GCGTATGATC 
ACTTTGCTCG TCGCCATGAG TGTGATTGCC TTTGCCTTGG TGATGTCGTC ACCGGTTGAT 
CCCATTGATG GGTTTGTAGG TTCAGAGTCC AATGTCTCCC AGGAGCAAAG GGATAATGTA 
GCCCGTTACT GGGGGCTGGA TAAGCCCCCG GCGGAGCGTT TTTTAATCTG GGCAGGGCAT 
GTGCTGCAAG GGGATATGGG GATTTCCAGC ACTTATCGCT TGCCGGTCAC CCAAGTGATC 
GGGGAACGGG TGAAAGCATC CTTAGCCTTA ATGGGAGTAG CCTGGGTTCT TTCCGGGGTA 
ATGGGCTTTG TCCTTGGCAT CCTGGCCGGG GTTAACCGGG GAAGGCTGCT GGATCGCTTC 
ATCAAAACGT TTTGTCTGGC TTTATCTTCA GCTCCGACGT TCTGGATTGG GCTTTTGATC 
CTGATGGTCT TCGCTGTGAA CCTGCAGTGG TTTCCCATTG GCTTAGCGGC TCCCATCGGC 
AAGATTGCCT CCGAGGTAAC GCTCTGGGAG CGGATACATC ACCTGATTTT GCCCGCTTTT 
ACACTAAGCA TCGTGGGAGT AGCCAATATT GCCCTGCATA CCCGGCAGAA AATGATCGAT 
GTTCTGGAGT CGGAGTATGT GCTCTTTGCC AGAGCAAGGG GAGAGTCCAC CTACAGCATT 
GTTAAGCGGC ACGGCATTCG CAATATTATG CTACCGGCGA TTACCCTGCA GTTTGCCTCT 
TTCAGTGAAT TATTCGGGGG CTCTGTCTTG GCAGAGCAGG TCTTTACCTA TCCAGGCCTG 
GGCAATGCCG TGACTCAGGC AGGACTGCGC GGCGATGTGC CCCTGTTTTT GGGAATTGCT 
TTGTTCAGTG CCGTCTTCGT CTTCACAGGG AATTTGCTGG CCAACCTCAT CTATGGTATC 
GTCGATCCCC ATATAAAGGA GGCTAACCCC CATGGATAA
 
Protein sequence
MKLRNKVLQK LIVPSFLRMI TLLVAMSVIA FALVMSSPVD PIDGFVGSES NVSQEQRDNV 
ARYWGLDKPP AERFLIWAGH VLQGDMGISS TYRLPVTQVI GERVKASLAL MGVAWVLSGV 
MGFVLGILAG VNRGRLLDRF IKTFCLALSS APTFWIGLLI LMVFAVNLQW FPIGLAAPIG 
KIASEVTLWE RIHHLILPAF TLSIVGVANI ALHTRQKMID VLESEYVLFA RARGESTYSI 
VKRHGIRNIM LPAITLQFAS FSELFGGSVL AEQVFTYPGL GNAVTQAGLR GDVPLFLGIA 
LFSAVFVFTG NLLANLIYGI VDPHIKEANP HG