| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1266 |
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| Symbol | |
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| ID | 7258236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1363877 |
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| End bp | 1364695 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643561179 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_002457759 |
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| Protein GI | 219667324 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00278648 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGAAA TTCCTGAAAT GGAAACGTAC AAGAATTATT TACAGCTATC CGTCCTTGAT
AAGAGAATTG TGGGAACCGA AATCACCAGG GCGCGCAGCA CCAATGTTCC TACCGATGAG
TTTGTGAGAT GGGTGCAGGA TACAAGTATT GAGCAGGTGT TAAGATATGG GAAATACCTC
ATCCTTGCCC TGAGCTCAGG GAAAGCCCTC TGCGCTCATA TGATGCTTGA TGGCAGAATG
TATTATGAAG TGGCGGGAGA ACCTGTAGAA TTGCCGGGCA GATCCCATAT CCGGCTGAAG
TTTGCCGATC ACTCCATTCT CCATTTTTGC GACTTAAGAT TAGGTTACCT TAAGCTGCTC
GCGCCATCCC AGGTGGACGC TATCAAGGAA GGGCTGGGTC TTGATCCTTT GGATGCGGAG
TTTTCCTTGG CCGCTTTTTT GAATATCCTT AGCGGGAAAA GAGGCATGAT TAAGCCTCTG
CTCATGGATC AAAAAAACAT ATCAGGCATA GGCAACGCCT ATTCCAACGA GATTTTATTT
GCCGCGGGAA TACTGCCGGA ACGCAAAACC CCCACCTTAA CCGATGGGGA GAGGGATCGG
CTGTATGGGG TCATCCCTGA TTTGCTTCAG CAAGCGATTG CCAAAGGGGG ATATATCGAA
GAGCCCTTTG CCTCCTGGGA TAAGTTAAGC GGAGGAATGA TTCCGTATTT TAAGGTTTAT
GATCGCACGG GACAGCCTTG CCTTCAATGT GGTGAGCCCA TAAAGCAAAA GACAGTTGGC
GGCAGGAATG CTTATTATTG TTTAACCTGC CAGCACTAA
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| Protein sequence | MPEIPEMETY KNYLQLSVLD KRIVGTEITR ARSTNVPTDE FVRWVQDTSI EQVLRYGKYL
ILALSSGKAL CAHMMLDGRM YYEVAGEPVE LPGRSHIRLK FADHSILHFC DLRLGYLKLL
APSQVDAIKE GLGLDPLDAE FSLAAFLNIL SGKRGMIKPL LMDQKNISGI GNAYSNEILF
AAGILPERKT PTLTDGERDR LYGVIPDLLQ QAIAKGGYIE EPFASWDKLS GGMIPYFKVY
DRTGQPCLQC GEPIKQKTVG GRNAYYCLTC QH
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