| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1253 |
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| Symbol | |
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| ID | 7258223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1351462 |
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| End bp | 1353378 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643561166 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_002457746 |
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| Protein GI | 219667311 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000228716 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCACAA AATTGCCGGA GGATTATGAA ATTGTCTTTG ATTTTGCAGC GATTGGCATG
GCCTTATTGT CCTTAGAAGG AGAGTTTTTA AGAGTCAATG CCTATTTTTG CCAGTTCTTT
GGGTATGACC CGATTGAATT GTCTAAACTG CTATTTTCGA AGCTGGTCCA TCCAGAAGAT
ATTGGGCTGG GTTTCCAGGA GATCCAAAAA CTTCTCTCAG GGGAAATACC GACATGTCAT
TTAGAAAACC GCTTTGTGCA TAAAACGGGT GAAATAAAAT GGGGATTATC CAGTGTCTCT
CTGGTACGGG ATGAGATGGG GATTCCTCTT TATAGCATAG TACAAATCCA GGATATAACA
GCCAGGAAGC GTGTGGAAGA TAATTTAAGT TATCGCGTTG AATTTGAAAG ATTTGTGACA
ACACTATCGA CAGGATTTAT CAATTGTCCG GTAGATAAAA TTGATGAAGA AATAACCAGC
GCTTTAGAAA AGATCGGCAA GTTCTTAAGA GTCGACTGTA TCTTCGTTGA CCAGTTTTAT
GAAGAAGGCA GGAAATATCA AAAAGTCATG GAGTGGAATC CGCCGGGGAT AACGCCATTT
TTAGCTCCGG AACTGACAGT GGAAGCTGTA CCGAGGCGGT ATAGGAAATT AAGTGAAAAA
GATGGTTTTA ACTATGCAGA AAAAGAGCAA ACTCTTAAAG CACAGCTGCT CCTTAATATT
CCCATAACCC AAGCTGGTGA AAATGTCGGC TTTATTGGTG TAGCCAGCCA TCAAGGCCAA
TCCTTTTCTG AAGAAGATAT TCGCCTTATT AAAGTAGTGG GAGAAGTGAT ATTCAGCGCT
ATCCAGAGAA AGCAGGCCGA GATCGCCCGC CGGAATTCTG AACAATTAAT AGCGGCTGCC
TTTGCAGCAA GCCCCGCGCT GATGATGATA CTATCCATGG AGGGAAAAGG AGTCATCGAT
GTCAACGATA CCTTTATTGA AGTTTTAGGC TATGACCGCA GTGAATTGCT TAATAAACAG
AGCGGGGAGC TTTCAGAATT GATTCGTCAA AGTGATTATG AACATATCTA TGAAACTTTA
AATCAGCACG GCACCATACT GAATCGTGAG ATCGAGCTGA TCACTAAATC CGGAATAAAA
AGAACGTGCC TTTTTTCAGC TGAAAAGATC ATGATTGGGA AGGAAATGTG CCTCCTGCTG
GTGAGCCAGG ATATTACGGA GAAGAAGTGC TTGGAAAAGG AAATGGCCCG CCTGGAGCGT
CTTGATCTAA TCGGTCAGAT GGCGGCCGGT ATCGGCCATG AGATCCGCAA TCCCATGACC
ACCGTAAGAG GCTATTTGCA GTATATTTCT AAAAAAGACA AGTATGCCGA CGAAATAGAG
ACTTTCCAGC TGATGATTGA AGAGCTGGAC CGGGCCAATG AAATCATCAC AGAATACTTA
TCCTTAAGCC AGGACAGGGT GGTCGATTTT AAACGCATCA ATTTAAACAC CATTATCCAG
CATCTCTATC CAATATTGTC CGTTCATACC AAGATGGAGG ATAAGAGCAT CGAGCTTAAT
TTAGGTTCCC TGCCTGAATT ATATCTGGAT AAAAAGGAGC TGTGTCAGCT CATCCTGAAT
CTGGTCCGCA ATGGTCTTGA AGCCATGCCG ATCAAAGGCA AGCTCACCAT ATCTACCTAT
ATACAACAAG GAAATGTTAT CCTTGAAGTA GAAGATCAAG GGAGAGGCAT ACCCAATGAG
ATAAAAGATA AGGTAGGGAC CCCCTTCTTC ACCACAAAGC TCAATGGGAC CGGCCTCGGT
ATGGCTATAT GCTATAGTAT AGCTGAACGG CATAATGCTC TGATTGACCT CCAATCCGGC
CCCCAAGGGA CGAAGGTCAG AGTGAAGTTT CAGGGTGCGG AGGAGGTTAA GGCTTAA
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| Protein sequence | MCTKLPEDYE IVFDFAAIGM ALLSLEGEFL RVNAYFCQFF GYDPIELSKL LFSKLVHPED
IGLGFQEIQK LLSGEIPTCH LENRFVHKTG EIKWGLSSVS LVRDEMGIPL YSIVQIQDIT
ARKRVEDNLS YRVEFERFVT TLSTGFINCP VDKIDEEITS ALEKIGKFLR VDCIFVDQFY
EEGRKYQKVM EWNPPGITPF LAPELTVEAV PRRYRKLSEK DGFNYAEKEQ TLKAQLLLNI
PITQAGENVG FIGVASHQGQ SFSEEDIRLI KVVGEVIFSA IQRKQAEIAR RNSEQLIAAA
FAASPALMMI LSMEGKGVID VNDTFIEVLG YDRSELLNKQ SGELSELIRQ SDYEHIYETL
NQHGTILNRE IELITKSGIK RTCLFSAEKI MIGKEMCLLL VSQDITEKKC LEKEMARLER
LDLIGQMAAG IGHEIRNPMT TVRGYLQYIS KKDKYADEIE TFQLMIEELD RANEIITEYL
SLSQDRVVDF KRINLNTIIQ HLYPILSVHT KMEDKSIELN LGSLPELYLD KKELCQLILN
LVRNGLEAMP IKGKLTISTY IQQGNVILEV EDQGRGIPNE IKDKVGTPFF TTKLNGTGLG
MAICYSIAER HNALIDLQSG PQGTKVRVKF QGAEEVKA
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