Gene Dhaf_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1248 
Symbol 
ID7258218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1344985 
End bp1347102 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content46% 
IMG OID643561161 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002457741 
Protein GI219667306 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000912456 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TACTGTCAAA AACCGGAAGT ATCGGACTGG ATAATTTAAA AATCCATAAC 
AAGCTAATCC TTATGGTGCT GTTCACTGTG CTCATACCCC TAATCCTCTT AAGCCTGATC
TTTATGAATA ATGCCGGCAA CAAAATCAAA GAACAGGTTA GCGCTGCCAA TGAACTGTAT
GCCGCCTTAA CAGAGGAACG GATGAGGGAG TATTTTTATA ACCGAGAAGT CGATGCCCGG
ATTCTGGCGA ACTCCAGAGT AATCAGTGAA GGAATGGCCA AGCTTAATAG TTTCGATTAT
ACCAAACTCG AATTGGCAGA ACTTAAGGAT AGGTTTAAAG AATTCCTCGA CATTCCTTTA
GAAGATCATG ATTACACAGA TATCGTTATC ACCAATAAGT ATGGTGAGAT AGTCTTCAGC
AATCGATACC CTCAAAATGA TATTGCTCCC GTGATCTTCT CCGGGGATTT CAATGAAAAA
GCCATGGGGG GAGAACAGAA CTGGTCGCCC ATATTCAGGA ATGCCTTCAT CGATGATAAC
CTCATTGTTT TGGCCACGCC TATCTATAGT AATACACAGG AAAAGACCCC TGGCGGCGTG
CTGAATATTA TTTTAAATCA GGAAAAGATC AACGGGATCG TTCAGAATGG TATCGATAAG
CTGGGAAGAA CGGGGGAATC CTACTTGATC GATGCCGAGG GGTTACTGCT TACAGATACC
ATGAAGGAGC AGGCCGCCGT ACATATTCCA CTAAAAGATT CGATCGAAAC CGAAGCGACA
AGTCTGCTCG CCGGGCCACT GACCAATGAA GAGGTGGCTT TCCATCAAAC CACTACCTAT
GAAAATTATC AGGGAAAACC TGTGATCGGT ACCCTGTCTT TGGTCAGGAT CGGAGATTAC
TTGGCGGGTT TGGTTATCGA AGTCGAAGAG GAGGAAGCCT ATGGAAGCAT AGGGGATTTG
CAAAGAAGTC TGGGTATCAT GGTTGTGCTT ATTATAGTGG CGGCGCTTTT TTTAGCTATG
ATTTTGGCAC AATCCATAAG TAAGCGGATC AGTGAGGTTA TCGGAGTTAC CCATGAAATG
GCCAACTACG ACTTGCAAAG CACGGGTATC AATGCCTTGG CAATAACCCG CAAAGATGAG
ATAGGGGATC TGGAGCGGGC CATCATCACG ATCAGAGACA ATTTAAAACG TATTATTCAG
GAAGTGGAAA AATCGGCCGG CGAAGTGGCT TCTTCCTCTC AGGAACTTAA GCTGAATGCT
CAGCAGTCTT CTCAGGCGGT AGAACAGGTC GTCAGGAATG CGGCAGAAAT AAGCGCAAGA
ACCCTGGAAC AGGCTCAGGC CGTTCGTGAA AGCTCTGCAA AATCCGGCGA ACTGAGCAAG
GTTATTATGG AAGCCAGCTT GAATTCAGAG GAAATGACCA AAGCGGCCAA TGACATGAAC
CAACTGATCC ATTCAGGGCT GATCATCATT GAAGTTTTAT CAACTATTAC CAACGAATCC
AGTACGGCCA ACCATGAGGT ATATTCCAGC ATTATTCAAG CCAAGGAAAG CTCTCAAAAA
ATTGAGAAGG CGACCCAGCT GATTACAAGC ATTGCCGAGC AGACCAATCT GCTGGCTTTA
AACGCGGCCA TTGAGGCAGC GAGGGCCGGT CAGCATGGCA GAGGATTTGC GGTTGTGGCG
GATGAGATCA GAAAGCTTGC CGAGCAGTCC AGGGAATCCA CAAGGATTAT TGAGGGCATC
GTCAATGACC TGAAGAAGGA TAACACTCAG TCTGTTCATA CTATGGAGAA ATTAGTAAAG
ATCAATAGTG AACAAGTGGA AAGTGTGAAC ATCACCAAGG ATAAGTACCT GGAAATTGCG
AAAGCCATCA AAACGGTTGA GGAACGGGTA CAAGACTTAA ATGAATCCAG TCTGGAGATG
GATAGGATGC GGTCGGAGGT TGAGGAAAGG CTTAACAGGT CAGTCAGGAT GACGGAAGAG
AATTCTGCCG GCATCGGTAA AGTATCAGAA TCAATGGAAG AGCAGGCTGC ATCCATGCAG
ATGATTACCA GCGCCTCGGA GGTACTGGAT GAATGCGCCC AGCATCTTCA GGTACTGGTA
AGCCGGTTTA AGCTATAG
 
Protein sequence
MKRILSKTGS IGLDNLKIHN KLILMVLFTV LIPLILLSLI FMNNAGNKIK EQVSAANELY 
AALTEERMRE YFYNREVDAR ILANSRVISE GMAKLNSFDY TKLELAELKD RFKEFLDIPL
EDHDYTDIVI TNKYGEIVFS NRYPQNDIAP VIFSGDFNEK AMGGEQNWSP IFRNAFIDDN
LIVLATPIYS NTQEKTPGGV LNIILNQEKI NGIVQNGIDK LGRTGESYLI DAEGLLLTDT
MKEQAAVHIP LKDSIETEAT SLLAGPLTNE EVAFHQTTTY ENYQGKPVIG TLSLVRIGDY
LAGLVIEVEE EEAYGSIGDL QRSLGIMVVL IIVAALFLAM ILAQSISKRI SEVIGVTHEM
ANYDLQSTGI NALAITRKDE IGDLERAIIT IRDNLKRIIQ EVEKSAGEVA SSSQELKLNA
QQSSQAVEQV VRNAAEISAR TLEQAQAVRE SSAKSGELSK VIMEASLNSE EMTKAANDMN
QLIHSGLIII EVLSTITNES STANHEVYSS IIQAKESSQK IEKATQLITS IAEQTNLLAL
NAAIEAARAG QHGRGFAVVA DEIRKLAEQS RESTRIIEGI VNDLKKDNTQ SVHTMEKLVK
INSEQVESVN ITKDKYLEIA KAIKTVEERV QDLNESSLEM DRMRSEVEER LNRSVRMTEE
NSAGIGKVSE SMEEQAASMQ MITSASEVLD ECAQHLQVLV SRFKL