Gene Dhaf_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1231 
Symbol 
ID7258201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1325523 
End bp1326971 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content46% 
IMG OID643561144 
Producthistidine kinase 
Protein accessionYP_002457724 
Protein GI219667289 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATTA TAAAAAAGCT TTTTTATTGG CCTCAGTCCG CTCCTATCAA AATGAAAATC 
ATGGGGATTG TTATTCTTTT TGTCTCTCTG CTGGGCCTGA TCGTCATCAT GGAAACCCGC
TCCCATATGC AGCAGATTTT AAGGGAGCAA TTGAAGGAAA GAGGCCGGGC TATTGCCAGT
GATGTAGCAG CAAGAAGCAC TAATCCTATG CTGATTGGGG ACTCCTTTTC ATTATATGAA
ATCCTTCAAG GCCTTCCTTC TCACTACGAA GATATCCGTT ACCTGATGAT TTTTGATAAG
AATGGTGAAC TTGTGACCCA TACTTTTGGA GAAGGTGTTC CCAGCGGCCT CCTTAATTTA
AGATCCATAC CCGCCGACCT TTCTCATGAC AACACCCTCT CCTTTAACTC CAATGAAGGT
GAAATTATTG ATGTTCTTGT CCCTATAGCA GACGGTAAAG TGGGCTGGCT GCGGCTTGGC
ATGTCGGAAA TCAGCATTTA CAGCAGCATC GATCAGTTAT CCCAGCTGCT CCTGATCACT
ACGGTAATCA TCTCACTCCT CGGGATCTTC GGAGCAATCC TTATCTCCCA TTTAGTAACA
AAGCCAATCC GCGATCTGGC GGCCGCCAGC CAAGGAATCT CCCTTGGTGA TTACAGCTTG
CGGGTATCCA TCTATGGTAC TGATGAAATA GCCGATTTAG GACATAATTT TAACGCCATG
GCCTTAAGTA TCCAAAACTA TGCCCAGGAA CGAGAAGCTT TGGTCGAGGA ATTGCAAGCC
AAGGAAACAG TCCGGCAAGA ATTGCTCAAG AAGGTCATTT CTGCTCAAGA GGATGAACGT
AAACGCATTT CCCGTGAGCT TCATGATGAA GCCAGCCAAA GCCTGACTTC CCTTATCCTC
GGCCTAAAAT ACCTCAGCGA ACTGGAAGAG CATGAAAAAA GTCCCGCTAT GGCATCCGAG
CTCAAAGAGC TTGCCTCCTC AACCTTGAAA GAAGTCCACC GCATTGCCGT TGAACTTCGT
CCTACGGTCC TTGATGATAT GGGCTTGGTT CCTGCCATTG AACGTTTTGT CAAGTTCTTC
AAACGACAGT ACCGTTTGGA TGTGGATTTC CATGCGCAAA ATCGGATTGC AAGCCGTTTG
CCCAATGAAA TCGAAATAAC CCTCTACCGG ATTGTTCAAG AAGCTCTAAC CAATGTAGCC
AAGTATGCGG AAGCCCGCAA CGCAAGTATT GTCTTGGAAA TCAAGCCGGA TTATGTCAAT
CTTATCATAG AAGATGATGG CAAAGGCTTT GACGTCGATC AGGTCCTTAA GTCTTCGGCC
AGTGATAGCC ATCTGGGAAT CGCCGGCATG CAGGAACGAA CTTCACTTTT AGGAGGTGAG
TTCACCATCG AATCTTCCCC AGATCAAGGC ACTGCGGTAT ATGTCCGTAT ACCTATGGAA
AGGAGATAG
 
Protein sequence
MTIIKKLFYW PQSAPIKMKI MGIVILFVSL LGLIVIMETR SHMQQILREQ LKERGRAIAS 
DVAARSTNPM LIGDSFSLYE ILQGLPSHYE DIRYLMIFDK NGELVTHTFG EGVPSGLLNL
RSIPADLSHD NTLSFNSNEG EIIDVLVPIA DGKVGWLRLG MSEISIYSSI DQLSQLLLIT
TVIISLLGIF GAILISHLVT KPIRDLAAAS QGISLGDYSL RVSIYGTDEI ADLGHNFNAM
ALSIQNYAQE REALVEELQA KETVRQELLK KVISAQEDER KRISRELHDE ASQSLTSLIL
GLKYLSELEE HEKSPAMASE LKELASSTLK EVHRIAVELR PTVLDDMGLV PAIERFVKFF
KRQYRLDVDF HAQNRIASRL PNEIEITLYR IVQEALTNVA KYAEARNASI VLEIKPDYVN
LIIEDDGKGF DVDQVLKSSA SDSHLGIAGM QERTSLLGGE FTIESSPDQG TAVYVRIPME
RR