Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1204 |
Symbol | |
ID | 7258174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1300049 |
End bp | 1302388 |
Gene Length | 2340 bp |
Protein Length | 779 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643561118 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_002457698 |
Protein GI | 219667263 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACTAA GCACCAAGAT GATTATCATT ACAGTAATAT TGATTGTTGT CATGGGGCTT TTAACTATGG GTGCAATCTC CACAATTGTT GAGCAAGCGA TGACTCAACA GTTAGAGGAA CAGGGCTTAA CTTATTCGCG AATGGCCGCG GATAATGTTG CTAACCCTCT ACTTGATGGA AACGTTCTCA TCGTACAGCG TACAATAGAA AACTTGCTGC AAACTGGTTC AGGAATATCC TATGTCTATG TTATTGATAA TTACGGGAAT GTGATTGCTC ATACATTTAG TGGGGGGTTC CCAAGTAATT TGACAAACAT TAATATTTTA GGATCCAATC AAATGAAGAA TACTATACTT TTAAATATGC AGTCACAGGG CTTAATCCGT GATGTAGGAG TTCGTATTTT AGAGGGACTA AATGCCGAAA TTCATATTGG ATTTAGTCAA AATAGCATTT TGCAATGGGT TTATAATGTA AGGAAACTCA TGTTGAATCT TACACTATAC GGAGTTTTAC TTGGAGCAGT TGCAGCTCTA ATTTTAAGTA CTTTAATTAC AAGACCATTA AAAAGGTTAG CTTCTTATGC TCTTCGACTC GGTAAGGGGG ATCTAGAAGA GGATATCGTT ATAAGAGGTA AGGATGAAAT CGTAGAATTA GCACTCTGCC TAAATCGAAT GAGGAAGGAC TTATTTACGG GTATGCAGAT GCTAAGGCAA TCTGAGGAGA GTAATCGAAC ACTACTCGAA GCCATAAGTG CCGCCGGGGA AGGGATTGCA GTATTTCAAG ATAACCTAAA TAAAAAAGGT ACCATGAAGT TCGTAAACGA ACAATACGAA AATTTAACAG GATATACCAA AGCAGAACTT TTAGAAATGG AAGCCAACGA GATCATAGAT TCTGAAAGCG GAAAGCAGAT TGAAGAGGTC TGGGAACGTT CAAAGCATGG GCTAAATCTA CCAAAGCAAA TTGAAATTCT TTTTAATAGA AAAGACGGTA CAAAACTCTA CATGGAAGCA AGTTATTGTA ATATTACCTA TGAGGGAAAT CCGGCCATTA TCTCTATAAC CAGAGATATA ACAGAGAAAA AGAAAACTTC TATGGAAATT ATCCGAAAAA ATCGTGAACT AGCCGCACTA AATGAGCTTT CTAAAGCAAT AAGTGGTCAT ATGAACTTGA AAGACAAATT ATATGAGGCA TTGAATACAA TACTTCAAGT TGTTGGAAAA CAAGCTGGTT GGATTTTCTT ATATAATGAA AGAGATAATG ATAATAAAGC TGAATTAATG TGTCAAATTG GTATTTTGCC TGAAGAAGCT TTGACCCAGA CTAAACAATT TCAAAGTTGT AGTAACTTTC CAAAACCAAA CTCAAACTCT ATTCAAGTGC ATTCTTCATT GAGTACAGCT TGCTCTATTA AACAATTATA TTTACCTGAT GGAACAAAAG CCTTAAGCCA CGTATATGTA CCCCTAAGTT ATAAAGATAG AGTTTTGGGA GTTTTAAATA TTATCGCTTC TAACTTAGAA TCATTTACAA AAGAAGATCT TAACCTGTTG AATTCGATTG GGTTGCAGCT TGGTGTAGCA ATCGAAAATG CCGAGTTGTG GGTTGAACTC AACAAGAAAG AGATGTTAAG GAAGCAGCTC TTAAATAAGG TAATTACAGC ACAAGAGGAA GAACGAAAAC GAATTTCTCG GGAATTACAT GATGAAAGCA GTCAATCAAT TGCAGCGCTT GGTGTAGGTC TAAAATCCGT TATTGAAATT ATGGAATTTG ACAAGGAGTA TGCTTTAACG GTTCTAGAAG ATTTAAAGAA TAATACTTCG TCGATTCTAA AAGAATTACA TCAAATTATT TATGATTTAA GACCATCTCT TCTAGATGAT TTAGGACTGT TGCCTGCAAT ACGGTGGTAT GTAGAAAGTC GATTAAGTAA CACAGGGATT AAACCTCATG TTGCATTTAC TGGAGACCCA TTACGACTAA CTGACGAAAC AGAAATAACA ATTTTTCGTA TTGTCCAAGA ATCGATTACC AATGCAGTTA AATACTCGAA TGCCAAAAAC CTATATTTGG GATTAGAATT TGGTCAGGAT TCTTTATTTG TATATATTGA AGATGATGGT GATGGGTTTA ATATAGAAAA AGCGTTAGCT CAAAAAGATG GAAAGGAATC ATTCGGACTA TTAGGAATGA CGGAGAGAGC AGAACTTATA GGGGGAGAAA TAGAAATAAA ATCTAGGAGT AATAATGGTA CTCGGATAGA ACTAAAGTTG GATTATCAAA ATTTTGAGGA GGACAGATAT GAAGAAAATC AAGGTCTTTC TGGTCGATGA
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Protein sequence | MKLSTKMIII TVILIVVMGL LTMGAISTIV EQAMTQQLEE QGLTYSRMAA DNVANPLLDG NVLIVQRTIE NLLQTGSGIS YVYVIDNYGN VIAHTFSGGF PSNLTNINIL GSNQMKNTIL LNMQSQGLIR DVGVRILEGL NAEIHIGFSQ NSILQWVYNV RKLMLNLTLY GVLLGAVAAL ILSTLITRPL KRLASYALRL GKGDLEEDIV IRGKDEIVEL ALCLNRMRKD LFTGMQMLRQ SEESNRTLLE AISAAGEGIA VFQDNLNKKG TMKFVNEQYE NLTGYTKAEL LEMEANEIID SESGKQIEEV WERSKHGLNL PKQIEILFNR KDGTKLYMEA SYCNITYEGN PAIISITRDI TEKKKTSMEI IRKNRELAAL NELSKAISGH MNLKDKLYEA LNTILQVVGK QAGWIFLYNE RDNDNKAELM CQIGILPEEA LTQTKQFQSC SNFPKPNSNS IQVHSSLSTA CSIKQLYLPD GTKALSHVYV PLSYKDRVLG VLNIIASNLE SFTKEDLNLL NSIGLQLGVA IENAELWVEL NKKEMLRKQL LNKVITAQEE ERKRISRELH DESSQSIAAL GVGLKSVIEI MEFDKEYALT VLEDLKNNTS SILKELHQII YDLRPSLLDD LGLLPAIRWY VESRLSNTGI KPHVAFTGDP LRLTDETEIT IFRIVQESIT NAVKYSNAKN LYLGLEFGQD SLFVYIEDDG DGFNIEKALA QKDGKESFGL LGMTERAELI GGEIEIKSRS NNGTRIELKL DYQNFEEDRY EENQGLSGR
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