Gene Dhaf_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1192 
Symbol 
ID7258162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1288017 
End bp1288949 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content43% 
IMG OID643561106 
Productphosphonate ABC transporter, periplasmic phosphonate-binding protein 
Protein accessionYP_002457686 
Protein GI219667251 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000205362 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTAA CAAAGAGAAG GTATTCATCT ATCATTTTCA TAGTTTTCGC TACATTGATA 
TTGACAGGCT GTCAAGTGAA TTCCACTCTG CCCTATGTCA GTTTGAAAAA TGTTGACTAT 
TCCCAAGCCA ATCCACAACC TTTAGAAAAT ACAGGCGTGC TTAAGGTGGG AGTGGCTTCA 
GTGTTATCCC CTCGGGAAAC GCTGGAGGAA TATGATAGGT TTGACGAATA TCTGGAAAAA 
GAAATCGGTC GGCCAGTGGA ATTGGTTCAA CGGGGGAGCT ACCAAGAGAT TAACAATCTT 
GTCAAAACTC AGGCCGTGGA TGTTGCTTTT ATTTGTTCAG GGGCATATGT GGTTGGAAAT 
AAGGATGATT TGGATCTTCT GGCGGTGCCC GTAGTTAATG GTAAATCTAC TTATCAGTCC 
TATATCATTG TCAACGCCCA GAGTCAAATC AGCCGATTTG AACAACTTAA GGGTTCGGTC 
TTTGGCTATA CCGATCCGAT TTCCTTTTCG GGAACCATCT ACCCAATGTA TCTGGTGAAT 
CAAATTCAAG CTTCTTCCAA TAATTTCTTT AATCGGGTTG TTTATACCTA CAGTCATGAT 
AATTCCATAA AAGCAGTGCT GGATGGCGTG GTCAATGCAG CAGGTGTTGA CTCCTTAGTA 
TACGAGTTCG CCTTATCCAA AGATCCAACG CTGGCCACTA AATTGAAGAT TATCAACCGG 
TCGCAAGAAG TAGGCAGTCC GCCAGTAGTT GTCAATAAAT TTATTGATCC AAACCTGCGG 
ACAGTTTTAC AAGAAGCTCT TTTACGCATG GACAGCGATC CATTAGGCCA GGAGGCATTA 
AAAAATCTGA ACTACGAACG ATTTGCCCTG CCCAGCCATC AGGACTATGG GGCCATAGAG 
GTAATGATAA AAGCTGTTCC AGAGCTGAAT TAA
 
Protein sequence
MRVTKRRYSS IIFIVFATLI LTGCQVNSTL PYVSLKNVDY SQANPQPLEN TGVLKVGVAS 
VLSPRETLEE YDRFDEYLEK EIGRPVELVQ RGSYQEINNL VKTQAVDVAF ICSGAYVVGN 
KDDLDLLAVP VVNGKSTYQS YIIVNAQSQI SRFEQLKGSV FGYTDPISFS GTIYPMYLVN 
QIQASSNNFF NRVVYTYSHD NSIKAVLDGV VNAAGVDSLV YEFALSKDPT LATKLKIINR 
SQEVGSPPVV VNKFIDPNLR TVLQEALLRM DSDPLGQEAL KNLNYERFAL PSHQDYGAIE 
VMIKAVPELN