| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1179 |
|---|
| Symbol | |
|---|
| ID | 7258149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1275926 |
|---|
| End bp | 1277155 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643561093 |
|---|
| Product | allantoate amidohydrolase |
|---|
| Protein accession | YP_002457673 |
|---|
| Protein GI | 219667238 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATA GTGAACGGGT TGATCGGCGC TTACGGGAGT TGGGGAAAAT AGGCTATAGA
GAATCAGGCG GAGTGACACG GCATGCATTT ACTCCTGAAG ATCGGGCTGC TAAAGATCTA
GTCATATCCT ATATGCAGGA AGCCGGATTG ATCGTCAGGG AAGATGCGGT GGGAAATCTG
ATTGGCCGTC GGGAAGGACG GAATCCCAAG GCACCGGTGG TGCTCACAGG TTCTCATATT
GATACGGTCT GTGATGGCGG AATCTATGAT GGCGGACTTG GCATCATCGG AGCCATCGAA
GTGCTGCAGT CTTTTAATGA GCAGGGAATC AGCACTGAAC ACCCCATTGA AGTCTACGCT
TTCAATGATG AAGAGGGCTC CCGGTTTAGC TTTAGTATGT TCGGAAGCCG CGGCGTGATT
GGTGACCTTA CCGAAAAAGA TTTAGAGATC AAAGACAGAA ACGGCATTAC TGTGGCCGAA
GCTATGCGCA ATCAGGGCTA TGACCCCAAT AAAATCAAGG ACGCCGTTCG CTCTCCGGAA
GAACTTAAGG CTTTTATCGA GCTCCATATT GAGCAAGGCA AGGTCTTGGA ATGCAATAAT
CTTTCCGTAG GGATCGTGAC AGGAATTGTC AACGAGCTAT GGATGAAACT TATTGTTAAA
GGGGAAGCAG GGCATGCCGG CGCCACTCCC ATGAATCTCC GCCAGGATGC TTTAGTGGCT
GCGGCGGAAA TGATTCAGGT CATCGAGGGG GAAGCTAAAA AGACAGGAAG CACGGTAGCA
ACGGTTGGCC GGCTCAATGT TTTTCCAGGA GGAATTAATA TTATTCCTGG CCGTGTGGAA
TTTACTCTGG ACCTGCGGGA TACCTCCCAG GAGGTCAGCG ATCAAGTGGA GGCGGCCATA
TTCAAGGACC TGGCCAGGAT CTGCCAGGAA AGAGGAGTTC AGTTGGAGAC CGAACTTCTG
CAACGGATTC CGCCGGCTCC TTGTTCCAAG GAATTCCAAA TCGCGGCTAA AGAAGCGTGT
AAAAAAATCG GCTTGCAGTA TTTCTGTCTT CCCAGCGGTG CGGGCCACGA TGCTATGCAA
ATGGTGAATA TCTGCCCTAT CGGTATGATT TTCATTCGTT CCAAGGATGG GATCAGTCAT
AATCCTGCCG AGTGGAGCAG CAGCGAAGAC TGTGCCGACG GTGTTAATGT GCTGTATCAT
GTGCTGCTGG ATACGGCGGT ACAGGTATAA
|
|---|
| Protein sequence | MINSERVDRR LRELGKIGYR ESGGVTRHAF TPEDRAAKDL VISYMQEAGL IVREDAVGNL
IGRREGRNPK APVVLTGSHI DTVCDGGIYD GGLGIIGAIE VLQSFNEQGI STEHPIEVYA
FNDEEGSRFS FSMFGSRGVI GDLTEKDLEI KDRNGITVAE AMRNQGYDPN KIKDAVRSPE
ELKAFIELHI EQGKVLECNN LSVGIVTGIV NELWMKLIVK GEAGHAGATP MNLRQDALVA
AAEMIQVIEG EAKKTGSTVA TVGRLNVFPG GINIIPGRVE FTLDLRDTSQ EVSDQVEAAI
FKDLARICQE RGVQLETELL QRIPPAPCSK EFQIAAKEAC KKIGLQYFCL PSGAGHDAMQ
MVNICPIGMI FIRSKDGISH NPAEWSSSED CADGVNVLYH VLLDTAVQV
|
|---|
| |