| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1165 |
|---|
| Symbol | |
|---|
| ID | 7258135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 1258696 |
|---|
| End bp | 1259259 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643561080 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002457660 |
|---|
| Protein GI | 219667225 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTACG TCGATCCCAT TAAAGATGTG GAGAGTATTA ATGCGATTAA AAAAATATTG
AGCAATCACT CCCAACGGGA TCTTTTACTT TTCGTTTTCG GTATTAATAC CGGATTGAGA
ATCAGCGACT TACTGGCTCT CAAGCTCAGC GACGTGTGGG AGGATGGCCG GATTAAAGAG
TTCTTGCTGA TTCAGGATGG AAAAAGCGGC GAAGAAAAAG CCTACTACAT TAATAACCGG
ATTCAGGAAG AGTTATTGAA ATACTTAGCC CTGGCCCGTT TGAACGGAAG CGATTATCTC
TTTAAATCCA AAAAAGACAA CCTGCCCATT ACCCGTCAGC AAGCTTATCG CATCATTAAT
CATGCCGCAC GGCAGGTGGG TATTCCCGGG AAGATCGGCA CTCATACTTT AAGAAAAACC
TTCGGCTATC ATGCTTTCCG AGCCGGTGTC GCAGTTTCCA TCTTGATGAA AGCCTTTCAC
CATCATTCTC CTTCGGAAAC CTTAAAGTAT ATCGGTATCA ATAAAGAAGA AACCCGCTTC
ATCAAAGTCA ATGTCAATTT GTAA
|
|---|
| Protein sequence | MEYVDPIKDV ESINAIKKIL SNHSQRDLLL FVFGINTGLR ISDLLALKLS DVWEDGRIKE
FLLIQDGKSG EEKAYYINNR IQEELLKYLA LARLNGSDYL FKSKKDNLPI TRQQAYRIIN
HAARQVGIPG KIGTHTLRKT FGYHAFRAGV AVSILMKAFH HHSPSETLKY IGINKEETRF
IKVNVNL
|
|---|
| |