| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1152 |
|---|
| Symbol | |
|---|
| ID | 7258122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1246040 |
|---|
| End bp | 1246867 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643561067 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_002457647 |
|---|
| Protein GI | 219667212 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000000110559 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTGC CTTTAGTGGG GTTAAAGGAT GAACGAAGTA CGATCAGGAT AGGGGATACG
ACTATCGGAG CCCGTGAGGT CGTGCTGATG GCCGGTCCTT GTGCCGTGGA ATCCGGAGAA
CAGATGCGGG CCGCTGCCCA AGGGGTCAAA GCAGCCGGCG GCAAGATTTT AAGAGGGGGA
GTCTATAAGC CCCGCACTTC CCCCTATAGC TTCCAGGGGT TAGGGGAAGA AGGAATAGAC
TATCTGAGGG AAGCTGCAGC GGAATATGGA CTTCTTACTG TGACGGAGGT TATGGATGAA
CGCAGCCTGG ATGTGCTGGT GGATAAAGTG GATATTCTGC AGGTAGGGTC CCGCAACATG
CAAAACTTCC ACCTTCTTAA GCTGCTGGGG GAGGTAAGAA ACCCGGTGAT TCTGAAGCGG
GGCCTGGCGG CCACGGTGGA GGAATGGCTT GCGGCTGCAG AATATATCTT AGCCGGCGGG
AATGCTCAGG TGATTCTTTG CGAGCGGGGG ATTCGCACCT TTGAGCCCAG CACCCGCAAT
ACCCTGGACC TCAGTGCGGT GAGCCTGGTG AAAGTGCTTT CCCATCTGCC GGTCATTGTG
GATCCCAGCC ATGCGGCTGG GAGGGTGGAT ATCATTCCTG CTTTAGCCAA GGCCGCTGTA
GCGGTAGGAG CCGATGGGCT GCTGATCGAA GTCCATCCCC ATCCTGAGGA AGCCCAAAGC
GACGGGATGC AATCTCTGAC TCCGGAGCAG TTTGCCCGAC TCGCCGCAGA GCTCCGGCCC
ATCGCTCAAA GCGTCGGACG AAGTATGGCT CATTCTCCAA AGGCCTGA
|
|---|
| Protein sequence | MNLPLVGLKD ERSTIRIGDT TIGAREVVLM AGPCAVESGE QMRAAAQGVK AAGGKILRGG
VYKPRTSPYS FQGLGEEGID YLREAAAEYG LLTVTEVMDE RSLDVLVDKV DILQVGSRNM
QNFHLLKLLG EVRNPVILKR GLAATVEEWL AAAEYILAGG NAQVILCERG IRTFEPSTRN
TLDLSAVSLV KVLSHLPVIV DPSHAAGRVD IIPALAKAAV AVGADGLLIE VHPHPEEAQS
DGMQSLTPEQ FARLAAELRP IAQSVGRSMA HSPKA
|
|---|
| |