Gene Dhaf_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1150 
Symbol 
ID7258120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1244208 
End bp1244882 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID643561065 
ProductSNARE associated Golgi protein 
Protein accessionYP_002457645 
Protein GI219667210 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value3.66321e-16 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATTGC TGCAGACCGT GTTGGACTTT TTTATTCACT TGGATAGTCA TATTGGTGAA 
ATCATAGCTT CTTATGGAGT GTGGACATAT CTCATTCTTT TTCTGATTAT CTTTGCCGAA 
ACAGGGTTGG TGGTGACCCC ATTTCTGCCC GGAGATTCTT TGATCTTTGT GGTAGGTACT 
TTCGCAGCCA GCGGTGCCTT GGATGTGTGG ATTTTGTTTT TCTTACTGCT GGCGGCTGCC 
GTCATCGGGG ATACGGTGAA TTATGAGGTC GGCCGTTTCC TGGGACCGAA AGTATTCTCC 
AAAGAAATGC GTTTCCTTAA CCATGAGAAT CTGATGAAGA CCCAAAGGTT TTATGAAAAG 
CATGGGGGTA AGACCATTAT CATTGCCCGC TTTCTGCCGA TTATTCGCAC CTTCGCCCCC 
TTTGTGGCAG GTGTCGGCAC CATGAAATAC CTGAGGTTCT TGGCGTATAA TTTCGTAGGG 
GCTTTATTGT GGGTTACGGT AGCTCTTTGC GCAGGTTATT TCTTTGGCAA TCTGCCTTTT 
GTAAAGGATA ATTTTACCTT GGTGATCTTT GCGATCATTG GCATATCGGC TGTTCCCGCG 
GTTTATGCCT ATATTAAGAA TTGGCTGCAG GGGAGAAACC AGCGCAAAGT AAGCACGAAT 
AATGAATCGA ACTAA
 
Protein sequence
MELLQTVLDF FIHLDSHIGE IIASYGVWTY LILFLIIFAE TGLVVTPFLP GDSLIFVVGT 
FAASGALDVW ILFFLLLAAA VIGDTVNYEV GRFLGPKVFS KEMRFLNHEN LMKTQRFYEK 
HGGKTIIIAR FLPIIRTFAP FVAGVGTMKY LRFLAYNFVG ALLWVTVALC AGYFFGNLPF 
VKDNFTLVIF AIIGISAVPA VYAYIKNWLQ GRNQRKVSTN NESN