| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1135 |
|---|
| Symbol | |
|---|
| ID | 7258105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1229244 |
|---|
| End bp | 1230206 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643561051 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_002457631 |
|---|
| Protein GI | 219667196 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000000516269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGGTT ATAAGATAGG GAGCTTTCTT TTAGTTCTCC TATTGTCAAT ATTGTTAATA
GGCTGCGCAG ACTTGGCGAA TCCTAATCCT CAGAACTCTC AGGATCAGAG GAACAGCGTT
AAAGAAGGGC AAAACCCCGG AAGTTTCTTA GGGAAAGATA ACGCGGATAC TAAGGCTTTG
CAGGTAAGCT TTATCGATGT AGGTCAAGCC GATTCAGCCC TGATTCAGAT TCCCAACGGC
AAAAATATAC TGATCGATGC CGGCAATAAT GCCGATGCCG AGTTCTTAAT CAAGTATCTC
CAAGACCGAG GGATTGAGGA AATTCATATC CTGATTGGAA CTCATCCTCA TGAGGATCAC
ATCGGAGGAT TGGATAAGGT TATCGAGAAG TTTAAGATCG GGCAGGTGAT TATGCCCAAG
GTGACCAGCA CTACCAGGAC CTTTGAGGAT GTTTTGCTGG CTGTCCAGGA GAAAGGCTTG
AAAATCAAGG AAGGGAAGGC CGGAGTCCAG TTGGATTTAG GGCCTCTTGA GGAAGGCATG
CCTGCCGTTT CAGCAGAAAT CCTTGCCCCT CTGTCCGGCC AATATGAGGA CATGAACAAT
TACAGCATCG TCCTGCGCTT AGTCTATGGA CCCCATGCCT TTCTCTTTAC GGGAGATGCG
GAAGATGTCT CGGAAAAAGA AATGCTGGCC GCTGGTGTAA ATCTAAAGGC TGATGTCCTG
AAAGTAGGTC ATCACGGCAG TAAATCATCG ACGACGAAAG ATTTTCTCGC TGCTGTAGCT
CCCAAGTATG CTATTATCTC TGTAGGGAAG GATAACAGCT ATGGTCACCC AACAGAAACT
GTTCTTAAAC GGTTAAGCGA TGCAGGGATT GGTATTTACA GAACCGATCA AGTCGGGACC
ATAACAGTGA CTGCCAATGG TTCCGCACTC ACATTTGCCA CAACAACCCA TGAGGTTCAA
TAA
|
|---|
| Protein sequence | MKGYKIGSFL LVLLLSILLI GCADLANPNP QNSQDQRNSV KEGQNPGSFL GKDNADTKAL
QVSFIDVGQA DSALIQIPNG KNILIDAGNN ADAEFLIKYL QDRGIEEIHI LIGTHPHEDH
IGGLDKVIEK FKIGQVIMPK VTSTTRTFED VLLAVQEKGL KIKEGKAGVQ LDLGPLEEGM
PAVSAEILAP LSGQYEDMNN YSIVLRLVYG PHAFLFTGDA EDVSEKEMLA AGVNLKADVL
KVGHHGSKSS TTKDFLAAVA PKYAIISVGK DNSYGHPTET VLKRLSDAGI GIYRTDQVGT
ITVTANGSAL TFATTTHEVQ
|
|---|
| |