Gene Dhaf_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1128 
Symbol 
ID7258097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1221452 
End bp1221787 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content49% 
IMG OID643561043 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002457624 
Protein GI219667189 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00311434 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAA TTATGAAAAA TATTGAGTTT TCCCAAGTTC TGGACCTGAA AGAGCTGATT 
ACTTACCAAC AGGGACAAGT GATCAGCCGC ACCCTTGCTC AGACTCCTAT CGTCAGCATT
ACCCTGTTTT CCCTGGATGA GGGGGAGGGA ATCAGCACTC ATACCACTTC GGGAGACGCC
ATGGTGCAGA TTCTGGATGG CGAAGCGGAA ATCACCATCG GAGATAAAGT CTTGATCGTG
AAAGAGGGAG AGACCCTGAT CATGCCCTCC GACGTTCCCC ACGGTTTGGA AGCCAGGAAA
CGGTTTAAAA TGCTTTTGAC GGTGATTAAG TACTAG
 
Protein sequence
MAQIMKNIEF SQVLDLKELI TYQQGQVISR TLAQTPIVSI TLFSLDEGEG ISTHTTSGDA 
MVQILDGEAE ITIGDKVLIV KEGETLIMPS DVPHGLEARK RFKMLLTVIK Y