Gene Dhaf_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1118 
Symbol 
ID7258087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp1213218 
End bp1213823 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content45% 
IMG OID643561033 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002457614 
Protein GI219667179 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00548751 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATA GAAGAGAACG CAAAAAAGAA GAAACCAAAT CAAGCATCAT CCACTGTGCC 
CTGGAACTAT TCAGGGCGAA AGGCTTCCCG GAAACTTCTA TGGAAGAAAT CGCTGAAAAC 
GCCGATATTT CCAAAGGCAC ATTGTACAAC TACTTTGAAA ATAAGGAGTC CATACTCAGT 
GCCTATGTTC AATCTGCCAT CATGGATTTC GGCGAGGAGA TGGAGGCTCA ACTCAAGGAG 
CACAGAGGAA TCGCAGCACA GCTTCGGCTC TTGCTGGATT TCAGACATGA TTTTTTCGGC 
AAAGATCCGG AGCTGACAGC CATCTACTTA AGTTTCAGGA TGCAGACCCT TTTTAATATT 
CCCTCAGCCA ATCCTTTCAA TCATCCCCAC CGCAGTGGGT TAGAGAAGGT CATTCTCAAT 
ATGATTGCCG AAGCTCAAAA AAACGGGGAA GTGAGGAAGG ACATCCCGAC TCTGGTTTTA 
GCCAGGAATT TTCAGCTTAT CACCGTAAAT TATTTCATCT CCTGCCAGTT TGTTCAGGAA 
CCTGCAGAGC TGGAGCAGTT GCGGGAGCAG CTCATTGAAG TGCTTTTAAG TGGGGCTAAA 
GCTTAA
 
Protein sequence
MMNRRERKKE ETKSSIIHCA LELFRAKGFP ETSMEEIAEN ADISKGTLYN YFENKESILS 
AYVQSAIMDF GEEMEAQLKE HRGIAAQLRL LLDFRHDFFG KDPELTAIYL SFRMQTLFNI 
PSANPFNHPH RSGLEKVILN MIAEAQKNGE VRKDIPTLVL ARNFQLITVN YFISCQFVQE 
PAELEQLREQ LIEVLLSGAK A