Gene Dhaf_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1112 
Symbol 
ID7258081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1205064 
End bp1205564 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content49% 
IMG OID643561027 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002457608 
Protein GI219667173 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02950] RNA polymerase sigma factor, SigM family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.91393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACCA TCGAAGAAAT CTATAAAACC TATGAAAAGC CTATCTTCCA CTACTTCTAT 
GGCCTGACAG GCAATACCCA TCTCGCCGAG GAATTGACTC AGGAAACCTT TTTTCAGGTC
CTGAGGACTT TTTCCGGATT CCGGGGGGAA GCCCAGGTGA CCACCTGGCT GTACAAGGTG
GCGCGCAATG TGTACAGCAT GTGGAAAAGA AAGCAGAAGA CAAGTTTCCC ACTGCCCGAA
TCGGATGTGT TAAAGGGGCC GGCGTCTTAT GAACCGGATA CGGTTCTGGA ATTCAAAGAG
AAGCTGACGC TGACCGGAAA AGTCCTTCAA GAGCTCCCTG AGAACTATCG GGAAGTATTC
TGGCTGAGGG AATGGCATGA ATTGGCTTAT GAGCAGATCG CCGTGATTAT AGGGAAGTCG
GTGCCCTGGG TAAAAGTTAC CTTACACCGG GCCAGGCTGC AGTTCCGTAA AAACTATGCA
GAAAAGGAGG GAAAAGAATG A
 
Protein sequence
MKTIEEIYKT YEKPIFHYFY GLTGNTHLAE ELTQETFFQV LRTFSGFRGE AQVTTWLYKV 
ARNVYSMWKR KQKTSFPLPE SDVLKGPASY EPDTVLEFKE KLTLTGKVLQ ELPENYREVF
WLREWHELAY EQIAVIIGKS VPWVKVTLHR ARLQFRKNYA EKEGKE