Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1112 |
Symbol | |
ID | 7258081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1205064 |
End bp | 1205564 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643561027 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002457608 |
Protein GI | 219667173 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02950] RNA polymerase sigma factor, SigM family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.91393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAACCA TCGAAGAAAT CTATAAAACC TATGAAAAGC CTATCTTCCA CTACTTCTAT GGCCTGACAG GCAATACCCA TCTCGCCGAG GAATTGACTC AGGAAACCTT TTTTCAGGTC CTGAGGACTT TTTCCGGATT CCGGGGGGAA GCCCAGGTGA CCACCTGGCT GTACAAGGTG GCGCGCAATG TGTACAGCAT GTGGAAAAGA AAGCAGAAGA CAAGTTTCCC ACTGCCCGAA TCGGATGTGT TAAAGGGGCC GGCGTCTTAT GAACCGGATA CGGTTCTGGA ATTCAAAGAG AAGCTGACGC TGACCGGAAA AGTCCTTCAA GAGCTCCCTG AGAACTATCG GGAAGTATTC TGGCTGAGGG AATGGCATGA ATTGGCTTAT GAGCAGATCG CCGTGATTAT AGGGAAGTCG GTGCCCTGGG TAAAAGTTAC CTTACACCGG GCCAGGCTGC AGTTCCGTAA AAACTATGCA GAAAAGGAGG GAAAAGAATG A
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Protein sequence | MKTIEEIYKT YEKPIFHYFY GLTGNTHLAE ELTQETFFQV LRTFSGFRGE AQVTTWLYKV ARNVYSMWKR KQKTSFPLPE SDVLKGPASY EPDTVLEFKE KLTLTGKVLQ ELPENYREVF WLREWHELAY EQIAVIIGKS VPWVKVTLHR ARLQFRKNYA EKEGKE
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