| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1103 |
|---|
| Symbol | |
|---|
| ID | 7258072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 1193582 |
|---|
| End bp | 1195378 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643561018 |
|---|
| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
|---|
| Protein accession | YP_002457599 |
|---|
| Protein GI | 219667164 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATT TTACAAGGAG AGACTTTCTC AAAGGTGCAA CAGCTACCGC TGCAGGGGTA
GCCTTAACAG GCATTCTCAC CGGCTGCTCC AGTGCCAGTG TCGGCACGGG AAATTCTGAC
CCCGTTGCTC CAGCTGATAG TGCCAGTACC GGTACTCCCA CCAAGAGCAC CAAATGGTAT
GATGAAGCGT ATTTCAAAAA GCCGGCATCC ATTACGGATA TTAAAGAAAA ATTTGATGTG
GATGTAGTGG TTGTCGGTGC AGGGAACGGC GGTTGCATCG CCGCCGTCAG TGCCGCTGAT
CTGGGCGCTA AGGTCGCTTG GGTCGAGCAA AATGCAGGAC CTATTATGTG GGCCGGTGAA
ATTCATGCCC TGAACTCCAA AGTCGGTAAG GAAAAATACG GCATAACCTT TACTGAAGCA
GAAAAGAATG AGATTGTCAA CGATATTTGC CGTTATGCAA GTTATGAAGT GGATCAACGT
TTAATTAAGT TATGGGCAGA CAACTCAGGG AGGACCATGG ACTGGTTTTC GAAAAAGATG
GCTGCCAAGG GTGTGAGCAT GCACGTTGAG ACCGATATGT ACAAAAGCGA TATGTACAGG
ACAAATAACC GCGGCGAGCA TTGTGCTTAC AAAGGCGAGT GGGTGGAAAT GGGGCCTAAA
AAGATGGGGT CCGAAGTTGC CAATCCCATC TGGGTGGAAA TCGCCACAGA AATGGGCGTT
CAGAAATTTT TCGAGCATAC CGCCCTGCAA CTGCTTCAGG ACAGCAGCGG AAAGGTAAAT
GGTATTATTG TTCAGCGTAA AAAGGATAAC GCCTATATCC AGATCAATGC GGCTAAAGGA
GTGATTATCT CCACAGGCGG ATACTCTGGG AATACGGAGA TGATGGATGC CCTTCGCTAT
CGCTGCAAAG ATAACGTTGT CAATAATCTG GGCGGTGCCG GACATAACGG CGATGGCATT
AAGATGGCTA TGTGGGCCGG AGCTGCCATT GATCGCAATC ATGGCGGCGG AGTTGCCTTT
GACCGAGCCG CTGTGGATTT GGACCATCAT ACTGGGGAAC CTTATACTTC CGGTCTGGAT
GATATGTGGT GGCCGGGAAG CCAGCCCTGG CTGGCGGTCA ATACCCACGG CGAGCGCTTT
ATGAATGAAA AGGCACCGTA TGATTCTAAA ATCCATGGCG CCAGCAAACA ACCCAAGCAA
ATCTGGTTCC AGATCTTCGA CAGCAATTAT TGGGAAGACG TCAATGCCTT CCATACGACC
ATTTGTTCAC GGGTAGTCGC CGCTCCGGGT GCCCGTAATT CCGAGGTACT GCCGGGTGTC
TTCCCATGCC AGACAAAAGA AGAATTTGAT AAGGCTTACA TGGAACCGGC TCTCAAAAGC
GGTAAGCTGA AAAAGGCCGA TACCCTGGAA GACCTGGCTA AGCAATTGGG CCTTCCGGCC
GACGCTTTGG CCGCTACCGT GAAACGCTAT AATGAGAATG CGGCGAAGGG CTTTGATGCT
GACTTCGGCA AAGATCCGGG AAGTCTACGT CCTGTCGCCC AAGGTCCCTT TTATGGTATT
GCTCTGGGGA ACTGGTTATT GTGCACCTTT AATGGCGTTA GAATTAATAC CAATATCCAA
GCCATCAATG AAAACGGTGA TCCCATCCAG GGTTTGTATG TAACCGGGAA CGACAGTGGC
GGCTTCTTTG CGAATACCTA TCCTCAATAC TATGGTGGAC TAGCTCATGG AAGAACCACC
TGCTTTGCCC GCTTGGCGGC TTTACATGCC ATAACCGGGT CCATTTACGA AAGTTAA
|
|---|
| Protein sequence | MSHFTRRDFL KGATATAAGV ALTGILTGCS SASVGTGNSD PVAPADSAST GTPTKSTKWY
DEAYFKKPAS ITDIKEKFDV DVVVVGAGNG GCIAAVSAAD LGAKVAWVEQ NAGPIMWAGE
IHALNSKVGK EKYGITFTEA EKNEIVNDIC RYASYEVDQR LIKLWADNSG RTMDWFSKKM
AAKGVSMHVE TDMYKSDMYR TNNRGEHCAY KGEWVEMGPK KMGSEVANPI WVEIATEMGV
QKFFEHTALQ LLQDSSGKVN GIIVQRKKDN AYIQINAAKG VIISTGGYSG NTEMMDALRY
RCKDNVVNNL GGAGHNGDGI KMAMWAGAAI DRNHGGGVAF DRAAVDLDHH TGEPYTSGLD
DMWWPGSQPW LAVNTHGERF MNEKAPYDSK IHGASKQPKQ IWFQIFDSNY WEDVNAFHTT
ICSRVVAAPG ARNSEVLPGV FPCQTKEEFD KAYMEPALKS GKLKKADTLE DLAKQLGLPA
DALAATVKRY NENAAKGFDA DFGKDPGSLR PVAQGPFYGI ALGNWLLCTF NGVRINTNIQ
AINENGDPIQ GLYVTGNDSG GFFANTYPQY YGGLAHGRTT CFARLAALHA ITGSIYES
|
|---|
| |