Gene Dhaf_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1085 
Symbol 
ID7258054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1178012 
End bp1179616 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content46% 
IMG OID643561000 
ProductABC transporter related 
Protein accessionYP_002457581 
Protein GI219667146 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000470508 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCCTTG ATATCAAAAA ATTAAGCCTT TATTCCGAAG ATAGAATCGG CATCGTGGGC 
ATTAATGGAG TGGGTAAAAC CACCTTGCTC AACCTTCTCA GCCAGAAGCT TGCACCTGAT
GAAGGATGGG TGAAAGCCTA TGGCCAGTCC TCAACGATTT CCCAGCTGGA GCCGCCTGAG
CATGACCTGA TCAGTCAGGA AATGGCATCG AAATTCAACA TCCCCATGAC CTATAGCGAG
AGTATGAGCG GTGGGGAAAA GACCCGCTTT AAGCTGGCCG CTTGCCTGAG CCAAAACAGC
ACCATGATCT TTGCCGATGA ACCCACCAGC AATATGGATC TGGAGGGAAT CGAACTGATC
GAGCACTATT TTGCGAAGTA TTCTGGCGGA TTATTCCTCA TTTCTCATGA CCGTACTCTC
CTTGACAGTT TATGCACTAA GATTCTGGAA CTGGAAGATG GCCGGCTTAA GATTTACCCG
GGCAATTACA GCAGCTATAG TGAGCAAAAG GTCAGGGAAA GAGAAAGAGC CCAGTCTGAA
TATGAGCACT ACGTTTCCGA AAAAAAGCGG CTGGAGAGAG TCGTGATCGA GACCGGCGAA
AAATCCAAAT CGGTCCGTAA GACTCCCCGG CGAATGGGAA ATTCCGAGGC CAGGCTCCAT
AAGATGGGAA ATCAAAAAGC CAAGGCTAAT CTTGACCGGG CCAAAAAAAG TGTGGAAACG
AGAATTGAGC AGCTGGAAGT TAAGGAAAAA CCTCAGCAAA CCGCGAAGAT CAAGCTGGAT
ATCGCTGATG CCCAGAAGCT GCATAGTAAG GTTATTATCG AGGGGAAGGG GCTCAACAAA
GCCTTTGCCG GTAAAGTCAT CTTCCAGAAT GCGGAGTTTC GTATTGAGAA TGAGGCCAAG
GTGGCTTTGA TGGGGCCTAA TGGCTGCGGA AAGAGTACCC TGCTTAAAAT GATCATCAAC
CGGGAAGATT CCATAAGGGT TGCTCCCAGT GCCAGAATCG GCTACTTTAG TCAGGATTTA
AGTATACTTG ACGAAGAGAC CAGTATCTTA GCCAATGTAA TGGAAGAAAG CATCCATGAG
GAGAGCTTTG TAAGACAATT GCTGGCCCGG CTGCTTTTTA AAGGGGATGC AGTCTATAAG
AAAGTGAACG TACTGAGCGG GGGTGAGCGG GTCAAAGCCT CTTTTGCCAA GATTCTCTGT
CAGGACTTTA ACCTGTTAAT CCTTGATGAA CCGACCAATT ATCTTGATAT TAATTCCCTG
GAGGTTATCG AGGATGCCCT GCAAAACTAT GAACGTTCCC TGCTGTTTGT TTCCCATGAT
CGCCGCTTCA TTAGCTCAGT GGCCAATCAG ATCATGACTA TTGAGAATCA TAGGATCAAG
ATGTTCAAGG GAGGCTATGA AGATTATTGG GCGCAGCAAA ACAAAGAGGG TGGCAAGGCA
AAGGAAGAAA TTGAAAAGGA AATCTTTATC TTGCAGAATC GTCTGTCGGA AGTGATTGGC
AGAATTTCCA TGCCTGCTAA AAAAGATAAT GTTGAAGAAC TTGATAAAGA ATATTATGCT
ATTTTAACTG AAGTAAAGCG ACTCAAAGGG ATGTTGGAGC TATAG
 
Protein sequence
MILDIKKLSL YSEDRIGIVG INGVGKTTLL NLLSQKLAPD EGWVKAYGQS STISQLEPPE 
HDLISQEMAS KFNIPMTYSE SMSGGEKTRF KLAACLSQNS TMIFADEPTS NMDLEGIELI
EHYFAKYSGG LFLISHDRTL LDSLCTKILE LEDGRLKIYP GNYSSYSEQK VRERERAQSE
YEHYVSEKKR LERVVIETGE KSKSVRKTPR RMGNSEARLH KMGNQKAKAN LDRAKKSVET
RIEQLEVKEK PQQTAKIKLD IADAQKLHSK VIIEGKGLNK AFAGKVIFQN AEFRIENEAK
VALMGPNGCG KSTLLKMIIN REDSIRVAPS ARIGYFSQDL SILDEETSIL ANVMEESIHE
ESFVRQLLAR LLFKGDAVYK KVNVLSGGER VKASFAKILC QDFNLLILDE PTNYLDINSL
EVIEDALQNY ERSLLFVSHD RRFISSVANQ IMTIENHRIK MFKGGYEDYW AQQNKEGGKA
KEEIEKEIFI LQNRLSEVIG RISMPAKKDN VEELDKEYYA ILTEVKRLKG MLEL