Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_1077 |
Symbol | |
ID | 7258046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1170577 |
End bp | 1171452 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643560992 |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_002457573 |
Protein GI | 219667138 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000027339 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGTA AACGATATGA ATTGAACAAA GAGCTGGCTC AGATGTTAAA GGGCGGCGTA ATTATGGATG TGACCACTCC GGAGCAGGCC AAGATTGCGG AAGCGGCCGG CGCCTGTGCG GTGATGGCAC TGGAAAGGAT TCCGGCGGAT ATCCGGGCGG TCGGCGGAGT TTCCCGCATG AGCGATCCGA AAATGATTAA AGGAATCATG GAAGCCGTCT CCATTCCTGT GATGGCGAAA TGCCGCATTG GTCATTTCGT GGAGGCTCAA ATTTTGGAGG CTGTTGAAAT CGATTATATC GATGAGAGTG AAGTGCTTTC CCCGGCTGAT GATGTCTATC ACATCGATAA GACCAGATTC AAAGTGCCTT TCGTCTGTGG AGCGAAGGAT TTAGGGGAGG CTTTGCGCCG CATCAATGAA GGGGCTGCCA TGATTCGTAC TAAAGGGGAA CCGGGTACCG GGGATATTGT TCAAGCAGTG CGCCATATGC GCATGATCAA TCGTCAAATC AGCCGCCTTG CCGGTATGCG GGAAGACGAG CTGTTCCAGG AGGCTAAAGA GCTGCAGGTT CCCTATGATT TAGTGCTTTA TGTTCATGAA CACAAACGCC TGCCGGTGGT CAACTTCGCC GCCGGTGGCG TGGCAACTCC CGGGGATGCG GCCCTGATGA TGCAGCTGGG GGCTGAAGGA GTATTTGTGG GCTCCGGCAT CTTTAAATCG GGAGATCCGG AAAAAAGAGC CCAAGCCATC GTCAAAGCTG TGACCAATTA CCAGGATCCC AAGGTGTTGG CAGAGCTTTC CGAGGATCTG GGTGAAGCCA TGGTAGGGAT TAACGAACAG GAAATCGAGC TGCTGATGGC AGAGCGGGGC AAGTAA
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Protein sequence | MDRKRYELNK ELAQMLKGGV IMDVTTPEQA KIAEAAGACA VMALERIPAD IRAVGGVSRM SDPKMIKGIM EAVSIPVMAK CRIGHFVEAQ ILEAVEIDYI DESEVLSPAD DVYHIDKTRF KVPFVCGAKD LGEALRRINE GAAMIRTKGE PGTGDIVQAV RHMRMINRQI SRLAGMREDE LFQEAKELQV PYDLVLYVHE HKRLPVVNFA AGGVATPGDA ALMMQLGAEG VFVGSGIFKS GDPEKRAQAI VKAVTNYQDP KVLAELSEDL GEAMVGINEQ EIELLMAERG K
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