| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1075 |
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| Symbol | |
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| ID | 7258044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1168074 |
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| End bp | 1168943 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643560990 |
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| Product | spermidine synthase |
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| Protein accession | YP_002457571 |
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| Protein GI | 219667136 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000000310388 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGGA AATTGCCGAC TTTTTTATCT GAAAACGAGC ATGGGTTATG GATGACGGAA
GATGAACGGG AAAACCTGAA GATTGATTAT CGGATTAAAG AGATCATAGT TGAAGCCAAA
TCAACCCTTC AGCATGTGAT GATTCTCGAT TCCTACAGCT TCGGGCGCAT GTTGGTATTG
GATGGGGCCG TGCAAACGAC TTCTCTGGAT GGTCATATCT ACAATGAAAC GATTTCCCAT
GTACCCTTAA GCATTCATCC CAACCCGAAG AAGGTATTGA TTATTGGCGG CGGAGATTGT
GGCGTTGCCA AAGAAGTGTG CAAATATTCC AGTGTTGAGC AGATTGATGT AGTGGAAATC
GATCCCATGG TGGTGGAGGT TTGTCTGAAA CATCTGCCTG AGGTCTCCGG AGGGTTAGCT
GATCCCCGGG TGAACTTCAT TTTTGATGAT GGTGTAAACT ATGTCCAAAA CTCCCCGACC
AAGTACGATA TTGTCATTGT GGATTCCTCG GATCCCATAG GGCCGGCGGA AGTCTTGATT
GAAAAGAGCT TTTACCGGAG TATATTCAAT GCTCTGGAGG AGGATGGCCT GATGGTTTGC
CAAAGCCAGT CCCCGATTTT TCATGGAGAA GTTATGGAAC AGATTTTTGA ACGGGTTCAT
GATATTTTTC CGAAGACGAA GATGTTTACA GCTGTGGTGC CTACCTATCC CGGTGGATTG
TGGAGCTTTA CCTTAGGGTC AAAGGGGTAT GTTATACCAA ATGAAGCTCG CATGAAAGAG
CTTGACGCCC TGTATGTGAA TGAGCAAATC ATGGCCAGCT GTTTTTCTCT TCCTGAGTTT
ATGAATAAAC AGCTGAGTAA GTATAGATAG
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| Protein sequence | MTRKLPTFLS ENEHGLWMTE DERENLKIDY RIKEIIVEAK STLQHVMILD SYSFGRMLVL
DGAVQTTSLD GHIYNETISH VPLSIHPNPK KVLIIGGGDC GVAKEVCKYS SVEQIDVVEI
DPMVVEVCLK HLPEVSGGLA DPRVNFIFDD GVNYVQNSPT KYDIVIVDSS DPIGPAEVLI
EKSFYRSIFN ALEEDGLMVC QSQSPIFHGE VMEQIFERVH DIFPKTKMFT AVVPTYPGGL
WSFTLGSKGY VIPNEARMKE LDALYVNEQI MASCFSLPEF MNKQLSKYR
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