| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1069 |
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| Symbol | |
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| ID | 7258037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1163535 |
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| End bp | 1164815 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643560983 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002457565 |
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| Protein GI | 219667130 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000354395 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAG CTTTACTGTT TAGTATCTTC GTTGTTCTCT TCCTTCTGCA TGTCCCCATT
GCAATTAGCT TGGCCATGTC CACTATTCTC ATTTTCACGC TTACATCAGA CTTTAATCTC
ATGATGATAC CCCAAAGAAT GTTTGCCGGA ATCAATACAG CACCGCTCAT GGCGATACCC
GGATATGTAC TGGCGGGAGT ACTCATGTCC CGGGGAGGGG TATCCAAATA TCTCATCGAA
TGTTTAAAGG CTTGGATCGG TCATTTGCCT GGTGGACTTT CCGTGGTCAC GATTCTTGCC
TGTACCCTTT TCGCCGCGAT TTCCGGTTCC AGCCCAGCCA CAGCGGCGGC GATTGGAGCT
ATCATGCTGC CGGCTATGTT GAAGGGTGGT TATCCTAAAC GTTATACAAT GGGCTTGATT
GCTGCCTCCG GAACCTTAGG TATCCTCATT CCTCCCAGTA TCCCTTTGAT CGTGTACGGG
GTGACTTCTG ATACTTCCAT CGGCAAGCTA TTTATGGCCG GCATCATTCC GGGTCTCATC
CTCGCTTCTA CTCTGGTGAT TATAGCCATT GTTTATGCCA AAATACACGG CTATGGACAG
ACAGAGAAAG CGACTTGGAG CGAGCGCTGG AAATCCACGA TAAGGGCTAT ACCTGCCAGT
TTTCTGCCTG TTTTAATTCT CGGCAGTATT TATGCGGGGA TTTGTACACC CACAGAGGCA
GCTGTTGTGG CAGTTTTCTA TACTCTAATC ATCTCTCTTT TTGTCTATAA GGAATTGCGT
CCGCAAGATT TTCGCAAGGT TTTGGTGGAA ACCATCAATA CAACCTCCAT GATTTTCCTG
ATCATTGCGG CAGCCATGGT CTTTGCTCTA TTCCTCACCA ATAATCAGGT ACCCAATAAG
GTGGCTGCTT GGATCGGTGA ATCCAGCGTT AATATCTTCG TCTTCTTCTT ACTTACCCAG
TTAATGTTCT TTGTTATGGG AACCTTCTTG GAGGCAGTGT CCATTATCTT GATCACCCTG
CCTATTTTGC TTCCGATTAT GAGAAGTATC GGCATCGATC CAATTCACTT TGCTATTGTT
ATGACGGTGA ATATGGAGTT GGCAATGATT ACGCCACCGG TCGGCCTCAA TCTCTTTGTG
GTGAGCTCTA TGGCCAAAGA AAAACTTGGG GAAGTGGTCA TGGGGGTTCT TCCCTTCATC
TTAGTGATGA TTGTGATGCT GATTGTCCTC GTGGTATTCC CCGAGCTTTC ACTTATGTTG
CCAACGGCTG TCATGAAATA A
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| Protein sequence | MTTALLFSIF VVLFLLHVPI AISLAMSTIL IFTLTSDFNL MMIPQRMFAG INTAPLMAIP
GYVLAGVLMS RGGVSKYLIE CLKAWIGHLP GGLSVVTILA CTLFAAISGS SPATAAAIGA
IMLPAMLKGG YPKRYTMGLI AASGTLGILI PPSIPLIVYG VTSDTSIGKL FMAGIIPGLI
LASTLVIIAI VYAKIHGYGQ TEKATWSERW KSTIRAIPAS FLPVLILGSI YAGICTPTEA
AVVAVFYTLI ISLFVYKELR PQDFRKVLVE TINTTSMIFL IIAAAMVFAL FLTNNQVPNK
VAAWIGESSV NIFVFFLLTQ LMFFVMGTFL EAVSIILITL PILLPIMRSI GIDPIHFAIV
MTVNMELAMI TPPVGLNLFV VSSMAKEKLG EVVMGVLPFI LVMIVMLIVL VVFPELSLML
PTAVMK
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