| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1066 |
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| Symbol | |
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| ID | 7258034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1160678 |
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| End bp | 1161694 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643560980 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_002457562 |
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| Protein GI | 219667127 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAA AAATATATGC TATTATCCTG GGTTGTTTGC TCTTGTGGAT TACTGGCTGC
CAAAGAAATG TGATTGATCA ACAACAAGTT ACTAAGGATG AAAGGATTGT TATTAAGTTT
TCCCATGTGG TTGCTGAAAA TTCTCCCAAA GGATTGGCGG CAGAGCGGTT TGCCTCGCTG
GTGCGCAGAA GAACCGGGGG ATACGTGGAG GTTCAAGTCT ATCCTAATTC TGAACTCTAT
AAAGATGGGG AAGAATTTGA TGCCTTAAAA AATGGTGCAA TAGAAATGAT TGCTCCGGCA
ACCTCCAAAT TATCGGCAAT GATCCCCGAG TGGCAGCTTT TTGACTTACC GTATGCTTTT
AATAATTTAG AGAATATCCC TTACTTCGTA GATGGTCCAG TTGGTCAAAT GCTATTGGCT
CGACTGGAGG AACATAGCAT GCTGGGGTTG GCCGTTTGGC ATAATGGGTT TAAGCAAATG
ACCAATAGCT CACATCCCTT GCAGCGACCT GAGGACTACA GGGGACTGGA ATTTCGCATC
ATGCCTTTTT CAAACACCCT AAAGTACCAA TTCGAAGTTC TCGGCGCCGT CGCTCATCCT
CTCGCCTTCA GTGATGTTCA TGCGGCCTTA GAGACAGGTG GAGTAGATGG AGAAGAAAAT
ACCATATCCA ACATTTTCAC GCAGCGTTTT GATCAAGTCC AAAAATACTT AACAATTAGT
GACCACGGAT ATTTGGGTTA TATAGTCATC GTTAACAAGG AGTTTTGGGA AGGATTGCCT
GAAGGTATCC GCAAAATCTT AGAAGAGGCT TTGGCGGAAG TGACTCTTTG GGAAAGGGAA
AAAGCTGCAG AGGTCAATGC CCAACAATTA GCGGCGTTAG AAAGAGAGGG AGAGATTAAG
ATTCACTACT TAAATGCTGA GGAACAGAAG GCTTTAGAAG AGGCCTTAGC ACCGGTTTAT
GAAATGCTGG CTGAGGATAT CGGTACTGAA TTAGTTGATC TAATGCGTAA TTCCTGA
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| Protein sequence | MSTKIYAIIL GCLLLWITGC QRNVIDQQQV TKDERIVIKF SHVVAENSPK GLAAERFASL
VRRRTGGYVE VQVYPNSELY KDGEEFDALK NGAIEMIAPA TSKLSAMIPE WQLFDLPYAF
NNLENIPYFV DGPVGQMLLA RLEEHSMLGL AVWHNGFKQM TNSSHPLQRP EDYRGLEFRI
MPFSNTLKYQ FEVLGAVAHP LAFSDVHAAL ETGGVDGEEN TISNIFTQRF DQVQKYLTIS
DHGYLGYIVI VNKEFWEGLP EGIRKILEEA LAEVTLWERE KAAEVNAQQL AALEREGEIK
IHYLNAEEQK ALEEALAPVY EMLAEDIGTE LVDLMRNS
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