Gene Dhaf_1052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1052 
Symbol 
ID7258020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1147604 
End bp1148962 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content53% 
IMG OID643560966 
Productnitrogenase MoFe cofactor biosynthesis protein NifE 
Protein accessionYP_002457548 
Protein GI219667113 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACCA ATCTCACCAA ACTGGATCTT AAAGATCAAG GGTGTCCAGC GGGAGCAGGT 
TCTCCCCAAT TGTGCATGAA GGCCCTGCCC GGTGAAGGGG CAGAACGCAG CTGCGCCTAT
GACGGAGCGC GGGTTGTGCT GATGCCGATT ACCGATGTGG CCCACCTCGT CCACGGACCG
ATTGCCTGTG CAGGGAACTC TTGGGATAAC CGGGGAGCCC GCTCCTCCGG TTCCCAGCTT
TTCCGCCGGG GGCTGACCAC GGATCTGATG GAGAATGATG TAGTTTATGG CGGTGAACGG
AAGCTCAAGG AGGCGATCCT GGAAATCGCC GCCCATCATC GCCCCCAAGC CATTTTTGTC
TATGCCACCT GTGTATCCGC CCTGATCGGC GATGATGTCA GCGCAATCTG TGAACAAGCG
GAGCAGGAAT TGACCATTCC CGTCATCGCC GTCAATTGCC CGGGTTTTTT GGGCGATAAA
AACATCGGCA ACCGGATTGC CGGGGAAGTT CTCTTCGACC GGGTCATCGG CACCGGGGAA
GGACCGGATG AAAAGGTGCC CCTTTCCGTA AACCTGATCG GAGAGTATAA CATTGCCGGT
GATCTCTGGG GTATCCTGCC GGATTTTGAG AACCTGGGAA TCACGGTGCA GGCAACAATT
ACGGGTGATG CCAAATTCGA GGACATCGCT TCCGCTCACC GGGCTTGTCT CAATGTGCTG
ATTTGTTCCA AAAGCCTGAC CAATCTGGCC CGCAAGATGG AAGAAAAATA CGACATCCCC
TTTATGGAGG GCTCCTTTTA TGGAATCCAC GACACCTCGG AGACTTTAAT CAATATTGCC
AAAGCCTTGG GAGACCTTGA TTTACTGAAG AGAACAAAAA CCTATGTGCA AAAGAAGGAA
GAGGAAACAC GGGAGATGAT TGCCGGCTAT AAAAAATGCC TGGAGCATAA ACAGGCCATC
TTGTTTACAG GGGGAGTAAA AACCTGGTCC ATGGTCTCCA CACTGGCTGA ACTGGGGATC
AACATTCTGG CGGGAGGGAC GCAAAACTCC ACTCCCGATG ATTTTCAACG GATGAAAGCA
CTGATGGATC CTACGGCTCA GATCATTGAG GATACCAGTC CGGCGGGATT CCTTAAAATT
ATTGCTGAGA AAAAGCCCGA TCTTATCGTC GCCGGGGGGA AGACAAAGTA CCTGGCCCAC
AAAACAAGAA CTCCTTTTTT AGATATTAAT CACGGCCGAA AACTGCCTTA TGCAGGTTAC
GAGGGGATGG TCACCTTTGC CGGGAGCCTG GCCCGGACGG TGAACAGTCC GGTTTGGGAA
CTTTTAAAAC AGGAATTTCC CCCGCGAGAG GAGGGATGA
 
Protein sequence
MFTNLTKLDL KDQGCPAGAG SPQLCMKALP GEGAERSCAY DGARVVLMPI TDVAHLVHGP 
IACAGNSWDN RGARSSGSQL FRRGLTTDLM ENDVVYGGER KLKEAILEIA AHHRPQAIFV
YATCVSALIG DDVSAICEQA EQELTIPVIA VNCPGFLGDK NIGNRIAGEV LFDRVIGTGE
GPDEKVPLSV NLIGEYNIAG DLWGILPDFE NLGITVQATI TGDAKFEDIA SAHRACLNVL
ICSKSLTNLA RKMEEKYDIP FMEGSFYGIH DTSETLINIA KALGDLDLLK RTKTYVQKKE
EETREMIAGY KKCLEHKQAI LFTGGVKTWS MVSTLAELGI NILAGGTQNS TPDDFQRMKA
LMDPTAQIIE DTSPAGFLKI IAEKKPDLIV AGGKTKYLAH KTRTPFLDIN HGRKLPYAGY
EGMVTFAGSL ARTVNSPVWE LLKQEFPPRE EG