Gene Dhaf_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1037 
Symbol 
ID7258005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1132772 
End bp1133941 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content47% 
IMG OID643560951 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_002457533 
Protein GI219667098 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000311878 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATC GAATGATTCC TTTTTCACCA CCTGATATAA CCGACCTGGA AATCAACGCT 
GTCGTGGAGG TCCTCAAATC CGGCTGGATC ACCAGCGGCC CGAAGGTTCA TTTACTGGAA
GAGAAGCTCC AGGAGTATTG CCAGGCAGAT CATGCTGTTG CCCTTGCCAG CAATTCTCAG
GGGCTGGATC TTATACTTAA AGTACTCAAT ATTTCGGGCG AGGCCGAAAT TTTAACAACT
CCCTATACTT ATGTGGCTAC GGCCAATGCC GCCCTCCATC GCGGCATTAA ACCTACCTTT
ATCGATCTGA AAAAAGACAG CTTCTTTATG GATGAGGAAA AGCTATACGA TGCCATCTCT
GATAAGACCA AGGTCATCCT CACCGTGGAT ATCGGCGGTG TTCCCATGGA TTATGACGTG
GTCAGAAATA TCCTAAGGGA AAAGAATCGG GAGGATATTC TGCTGATATC CGATTCCGCC
CACTCCATTG GCGCTGCCTA CAAGGGAGCT CCCGTAGGAA CGCAATTTGA TTTCCATGTC
TTCTCCTTCC ATGCTGTTAA GAACTTGACC ACCGCCGAAG GGGGAGCCAT TACCTTTAAC
GGTGATCGGG AAAACTTAGC CCAGGTCTTC AAGTACAGTT CCTTGAATGG ACAAACCAAG
GATGCCCTAT CCAAGATGAA AGCGGGAGCA TGGCGTTACG ATATCTTAAC TGACGGATTG
AAGTGCAATA TGACCGATAT TGGGGCTGCC ATTGGCCTGG TTCAACTGGA TCGCTATGAT
AAAATTCTCG GCCAGCGAAA GAAGCTCTCC CACATCTATC ATTCCATCCT CTCGGAAAAA
GAGTGGGCAC TCTTACCCTT ATTGGAAAAT GATATCATGG AAAGCTCCTA TCATCTCTAT
CCTTTGCGAA TCCAAGGGTT CACCGAGGAG CAACGGGATC GGGTGATTCA AGAGCTGGCC
GAAATGGGCA TAGCCACCAA TGTTCACTAT ATTCCCATCC CCATGTTTAC TTATTACAAA
GAGTTGGGCT ATGATATTCA GGATTACCCC AATACCTATG CCCAGTATGC CAATGAAATC
ACCCTACCCC TCTATTCCAT CCTGACCTCC GCTGATTGTG AATACGTGGC GGAGAACGTG
ATTAAAGCTG TTGAAAAACA TAGGAAATAA
 
Protein sequence
MNNRMIPFSP PDITDLEINA VVEVLKSGWI TSGPKVHLLE EKLQEYCQAD HAVALASNSQ 
GLDLILKVLN ISGEAEILTT PYTYVATANA ALHRGIKPTF IDLKKDSFFM DEEKLYDAIS
DKTKVILTVD IGGVPMDYDV VRNILREKNR EDILLISDSA HSIGAAYKGA PVGTQFDFHV
FSFHAVKNLT TAEGGAITFN GDRENLAQVF KYSSLNGQTK DALSKMKAGA WRYDILTDGL
KCNMTDIGAA IGLVQLDRYD KILGQRKKLS HIYHSILSEK EWALLPLLEN DIMESSYHLY
PLRIQGFTEE QRDRVIQELA EMGIATNVHY IPIPMFTYYK ELGYDIQDYP NTYAQYANEI
TLPLYSILTS ADCEYVAENV IKAVEKHRK