Gene Dhaf_1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1031 
Symbol 
ID7257999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1128098 
End bp1129069 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content46% 
IMG OID643560945 
Productbeta-lactamase domain protein 
Protein accessionYP_002457527 
Protein GI219667092 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0210455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGGG AAGTCTACCC CCAGATTTAC TTAAATGAAA TACCCTTGCC AAAAAATCCA 
CTGAAGGCAT TAAATAGCTA TATTATCCCC TCTCAAGGCC GTTCCTTGAT TTTGGATACA
GGGTTTAATA GGGAAGAGTG TAGGAATGCT CTGATGGAAG GAATCAGAGC GTCAGGCATC
GACCTGAAAC GGACAGATTT GGTGCTGACC CATATGCATG TGGACCATTC CGGGCTGGCT
GACTATTTGT GGAAACAAGG GTGTAAGGTC TATATCGGAA AGAAAGACGG TATTCTGCTC
AATAATTTCA GAACCTCTCC TGAACAGGTG CTGGGGCATT TGAGTGAGGG TCTTAATTTG
AACCAGGGAA TCGGCATGAA AGAGATTGAG GCCTTCGACA TAGCCCCTAA GGAACCCTTT
GCATACACCC CATTGCAAGA AGGGGATTGC TTAGAAGTGG GTCCCTATCG GTTCGAAGTG
ATCGATATTC CAGGCCATAG CCCCGGACAT ATCGGTTTAT ACGAAAGAAA GCATAAGCTG
TTTTTGGGCG GGGATCATGT CCTGAATGAA ATTACCCCGA ATATTACTTT TTGGCATTAC
AAAATCGATA GCCTGGGAAA TTTCATGGAG AGCCTGAACA AAATTCGCCG GTTTGACATT
GACTGGGTGT TTCCGTCTCA TCGCAGTCTT ATTCAAGACC ATCGGCAACG GATTGATGAA
TTGATCATTC ATCATCAGGA ACGACTTGAG GAAATCACCG GGATTCTGCG TGATGGCCAA
AAATCAGTCA TAGAGACAGC GGCAAGAATG CATTGGGATT TGAGCTATAA GAGCTGGAAT
GATTTTCCCC TTACCCAGAA GTGGTTTGCC TCAGGTGAAG CTATGGCTCA TCTGGAGCAT
CTGGTGTACA AAGGGGAGGC TCAGCGGGTG AACTCCGAGG GGAAGCATTA TTATGAATTG
GTTAATCCAT GA
 
Protein sequence
MIREVYPQIY LNEIPLPKNP LKALNSYIIP SQGRSLILDT GFNREECRNA LMEGIRASGI 
DLKRTDLVLT HMHVDHSGLA DYLWKQGCKV YIGKKDGILL NNFRTSPEQV LGHLSEGLNL
NQGIGMKEIE AFDIAPKEPF AYTPLQEGDC LEVGPYRFEV IDIPGHSPGH IGLYERKHKL
FLGGDHVLNE ITPNITFWHY KIDSLGNFME SLNKIRRFDI DWVFPSHRSL IQDHRQRIDE
LIIHHQERLE EITGILRDGQ KSVIETAARM HWDLSYKSWN DFPLTQKWFA SGEAMAHLEH
LVYKGEAQRV NSEGKHYYEL VNP