| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_1012 |
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| Symbol | |
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| ID | 7257980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 1103103 |
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| End bp | 1104776 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643560926 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_002457508 |
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| Protein GI | 219667073 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000269973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATG TGGACAATTA TCGCCGAGGG TATTTCATGC CCCCTGTCAA AAGCTTAAAG
TGGGCGGAGA AGGAGTATAT TACTACGCCA CCCACCTGGT GCAGCGTTGA TCTGCGGGAC
GGCAACCAGG CCTTGGTGGT GCCGATGAGC CTGGAAGAAA AACTGGAATA TTATCACATG
CTCTTGAAGA TTGGCTTTAA GGAGATTGAG GTGGGTTTCC CGGCCGCCTC GGAAACAGAG
TATGCTTTCC TGCGCACCCT TATTGAGCAG AATTTGATTC CTGAAGATGT GACCATTCAG
GTCTTGACCC AATCCCGTGA CCATATTATC GAAAAGACCT TCAAAGCTTT GGTGGGAGTC
AAAAAGGCAG TCGTCCATCT CTATAATTCC ACCTCTGTAG CCCAGCGGGA GCAGGTCTTT
AAAATGAGCC GGGAGGAGAT TGTGGAGATC GCCGTCAGTG GTGCCCGGCT GCTGAAAAAG
TATGCCGCAG AGACGGAAGG GAATTTCCAA TTTGAATATT CGCCGGAGAG CTTTACCGGT
ACAGAGATGG AGTTTGCCCT GGAAATCTGC AATCAGGTCC TGGATGTGTT TGAACCTACC
CCGGAAAACA AAGTGATTAT TAACCTGCCG GCCACCGTTT CCCTGTCCAT GCCCCACGTC
TATGCCAGTC AGATTGAATA TATGAGCGAG CATCTCAAAT ATCGGGACAA TGTGATCTTA
TCCCTCCATC CCCATAATGA TCGGGGTACT GCCGTAGCTG ATGCGGAGCT GGGCTTGCTG
GCCGGTGGTC AACGCATCGA GGGGACCTTG TTTGGCAATG GGGAACGCAC CGGCAATGTG
GATATCGTCA CCTTAGCCCT TAACCTGTTT TCCCATGGTG TGGACCCCGG CCTCAACTTC
GCAAGCATGT TGGAAATCAC GGCCAAGTAT GAAGCGTTGA CCCGGATGAA AGTCCATGAC
CGCCAGCCTT ATGGGGGCAA GCTGGTTTTT GCAGCCTTCT CAGGTTCCCA TCAGGATGCC
ATCACCAAGG GCATAAAATG GCGGGAAGAG CATGAGTGCC ACTATTGGAA TGTGCCCTAT
CTGCTTATCG ATCCCCAGGA CATCGGCCGG GAGTATGAGG GAGATGTGAT CCGCATTAAT
AGCCAGTCGG GTAAGGGGGG CATCGCCTAT ATGCTGGAAC AGCATTATGC TCTTGATTTG
CCGGCTAAGA TGCGGGAAGC CTTCGGCTAT AAGGTGAAAA ATGTCTCCGA TAACCTGCAC
AAAGAACTCA TGCCTGAAGA AATCAAGGAT ATTTTCTTCA AGGAATATGT CAATATTGAG
AACCCCATTA AATTCCTCAA CTTCCACTTC CTCAACCATG ATGATTTTCA GACTACGGTT
ACTCTTGAGT TCAAGGGTGA GATTCAGGAG TTATCCGGGG AAGGGGACGG TCGTTTGGAT
GCCATCAGCA ATGCTCTCCA GGCTCGCTTG GGGTTATCCT ACTCTAACCT GATCTATAAA
GAGCATGCTT TGGAATTAGG CTCCAAGTCA CAAGCCGTTT CCTATGTGGG AGTCACCGGT
CCGGATGGGG TGATTCATTG GGGATGCGGA ATTCACACCG ATATCTTTAC TTCTTCGGTT
AAAGCGTTGA TCAGTGCTAT TAACACCATG ATCAAGGATT CAGCTGCGGT TTAA
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| Protein sequence | MKNVDNYRRG YFMPPVKSLK WAEKEYITTP PTWCSVDLRD GNQALVVPMS LEEKLEYYHM
LLKIGFKEIE VGFPAASETE YAFLRTLIEQ NLIPEDVTIQ VLTQSRDHII EKTFKALVGV
KKAVVHLYNS TSVAQREQVF KMSREEIVEI AVSGARLLKK YAAETEGNFQ FEYSPESFTG
TEMEFALEIC NQVLDVFEPT PENKVIINLP ATVSLSMPHV YASQIEYMSE HLKYRDNVIL
SLHPHNDRGT AVADAELGLL AGGQRIEGTL FGNGERTGNV DIVTLALNLF SHGVDPGLNF
ASMLEITAKY EALTRMKVHD RQPYGGKLVF AAFSGSHQDA ITKGIKWREE HECHYWNVPY
LLIDPQDIGR EYEGDVIRIN SQSGKGGIAY MLEQHYALDL PAKMREAFGY KVKNVSDNLH
KELMPEEIKD IFFKEYVNIE NPIKFLNFHF LNHDDFQTTV TLEFKGEIQE LSGEGDGRLD
AISNALQARL GLSYSNLIYK EHALELGSKS QAVSYVGVTG PDGVIHWGCG IHTDIFTSSV
KALISAINTM IKDSAAV
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