Gene Dhaf_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0978 
Symbol 
ID7257946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1067153 
End bp1068511 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content42% 
IMG OID643560892 
Producttransposase IS1182 family protein 
Protein accessionYP_002457474 
Protein GI219667039 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATA TTCGCCAAGA ACGTCTATTT TCCTTGGAGG AAATTTTAGA AACTTCTCCA 
AGAGATTCAT ATTCTCTAAT TCTTGGGTCT TTGGACATTA TTCCTTTACT CAATGCAGTT
TCTAAAAAGG CTATCTTTGG AGCCCCAACT CAACTAAACT ATTCTGCTAT GATCTACTCA
TTAATCATTC GAGTAATTGA AAGAATCCCT ACAATTAAGG ATTTGCGTAA GCGGTTAAAG
AACAGCTTAG AGTTTCGATT CGACTGTGGA TTCACTCTTG CTGACTCTGT TCCTAGTGAA
GCATCCTATT GCCGGATGAT TAAGAAAATC CAAGATTCCT CTGCCTTGGC AAATTCTCAG
GATGATTTGG TGCTTCAGGC ATTCAAAGAA GGGTTTATCG GTCCGAAATG TGCTGTTGCA
ATCGATGCTA CCCATATCGA AGCCAGAGAT CGCAAGCCTG AAAAAAAGAA GGAAAAAACA
GTGGTTGAGC AAGCTCCCAA AAAGCGTGGT CGAAAGCCCA AAGCAGAACG CGAGGCTTGG
CTCAAAGAAC AGGAGGAGCT AGAAAAGAAT CGCCCCATAT TTGAAAAGAA GATTGAAGAT
CAACTTCCCT ACAGCTTTAC AGAATTAGTA CAACACATCC CACTTGATCC TCAATGGGGT
ATTAAGAAGA ATTCAGAAGG TAAAAACGTG TTCTGGTATG GCTTCAAAGG GCACCTCCTT
GTCGATTGTA AGGGCCAATA CGTTTTAAGC TCCTTACTCT CTTCGGGGAA TATAAATGAC
GGAAAAATGG CCATTCCTCT AATTAAAGCT CTGAGTGAAA AGCACCCTTA TTTGAACCCC
TCCCATATCC TTGCGGATGC AGGATATGAC TATGCTCCAA TTTACGAGCA AGCTAGAAGT
ATAGGAGCAC AAGCGCTGAT TGATTACAAT CGACGAAATG AGCAACTTCC AGAGGGCAAA
GATAAATATT TTCGTCCAAT ATGCCAGAAG GGTTATTCAT ACCGCTACGA CAGCTATGAT
CCATGCTATG ACACTGTAAA ATATACTCAA CCCAAGGAAT GCAAGGAGTG TTCACTTAGG
GAAAGCAATA CCTGTCAAAG GGTGTTTAAG ATGAAGGTTT CATCAGATCC TAGAAAATAC
ACTGTACCAG CTAGGGGAAG TGACCGTTAC TTTGAACTTT ACAAACAACG AACTGCTGTA
GAGCGAGTCA ATGCGTATCT CAAGGAGTAT TTCCAGCTCA ACAATATCCG TCATCGTGGA
AAACGTGCCC AAGTAGATTT TCAGTTTTCA ATCTTGGCCT ATACCCTATG CAAATTAGCT
GTCGATCGCC TAAATAAGTC AACGAGTATG GCCGCTTAG
 
Protein sequence
MFNIRQERLF SLEEILETSP RDSYSLILGS LDIIPLLNAV SKKAIFGAPT QLNYSAMIYS 
LIIRVIERIP TIKDLRKRLK NSLEFRFDCG FTLADSVPSE ASYCRMIKKI QDSSALANSQ
DDLVLQAFKE GFIGPKCAVA IDATHIEARD RKPEKKKEKT VVEQAPKKRG RKPKAEREAW
LKEQEELEKN RPIFEKKIED QLPYSFTELV QHIPLDPQWG IKKNSEGKNV FWYGFKGHLL
VDCKGQYVLS SLLSSGNIND GKMAIPLIKA LSEKHPYLNP SHILADAGYD YAPIYEQARS
IGAQALIDYN RRNEQLPEGK DKYFRPICQK GYSYRYDSYD PCYDTVKYTQ PKECKECSLR
ESNTCQRVFK MKVSSDPRKY TVPARGSDRY FELYKQRTAV ERVNAYLKEY FQLNNIRHRG
KRAQVDFQFS ILAYTLCKLA VDRLNKSTSM AA