| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0963 |
|---|
| Symbol | |
|---|
| ID | 7257931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 1054508 |
|---|
| End bp | 1055791 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643560878 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_002457460 |
|---|
| Protein GI | 219667025 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTA CACAAAACGA GAAACTAAAG CAACTATCCG AAAGAAGTAT TGTCATCGGA
GTGGACATCG CCAGCGAGCT TCATTACGCA AGGGCTTTTG ACTGGCGAGG AGTCGAGCTG
GGCAAGGTAT TCAAGTTTGA GAACAGCGCT GAAGGATTCA AGAATCTCTA TGCATGGATT
GAACGTATAA AAAGGCAAGC ACAAAAGGAC AGCATTGTGG TAGGGGCAGA GCCAACCGGC
CATTACTGGT TTGGCCTGGC ATCATACCTA AAAGAGCAAA ACATAAAGTT AGTACTCGTA
AACCCATTCC ATGTAAAGCG TAGTAAGGAG CTTGATGACA ACCACCCCAG CAAAACGGAT
GCTAAGGATC CCAAAACCAT CGCTAAGCTG GTCATCGAGG GTAGATACAA TGAGCCCTAT
ATACCGGAGG GGCTCTATGC AGAACTACGA ATAGCGGTGA CTTGCAGGGT GCGTATACAA
AAGGAAATGA ACAGCATAAA AAATCGTATT CAGCGATGGC TGAAGATCTA CTTTCCCGAG
CATGAAACTG TGTTTGGAAA GTTTGATGCC ACGAGTAGTA TGCTCGTGTT GCAAGTCGCT
CCGCTACCTA GGGATATTGA GAGGCTTGGA GTAGAAGGAA TAAACCGAAT TTGGAGAGAC
AACAAATTGA GGGCAGTCGG AATGAAAAGG GCTAAGAGCC TGTATGAGGC TGCTCAGAAG
AGTATTGGTT GCACCGAAGG AGAGTCTTGT TCCCGAATGG AAATCCAGCT ATTACTCCAA
GACTATCACA CTAAAACGGC ACAATATCAG GCAGTCACTG AAACCATCGA TGGATTGTGC
CGCCAGATAC CCGAAGTAGC CAAGCTGCTT GAAATCAAGG GTGTAGGCCT TGTCACCGTG
GCAGGTTTTC TCTCTGAAGT TGGGGATATT AAACGCTTTA ATTCTCCAAA GCAAATCCAA
AAACTCGCAG GGTTGGCCTT GCGAGAGAGT AGCTCAGGTA AGCACAAAGG GCAAACCACA
ATCAGCAAGC GAGGCCGAGC GCGGCTGAGG GCGATTCTAT TTCAAGCGGT GATGCCGCTC
GTCGCCAAAA ACGCAGAGTT CGCAGAGATA CACAACTACT ATACGACCAG GACCCAAAAT
CCTCTGAAGA AGAAACAATC GTTAATTGCC TTAAGCTGTA AACTGATCCG GGTATTCTAC
GCCATATTAA CAAAGGGTAC AGACTACGAC CCGAAAAAGC TCATTATGGA CATTCATCGT
CCGGTTGAGT ATTTAGCAGC GTAA
|
|---|
| Protein sequence | MNFTQNEKLK QLSERSIVIG VDIASELHYA RAFDWRGVEL GKVFKFENSA EGFKNLYAWI
ERIKRQAQKD SIVVGAEPTG HYWFGLASYL KEQNIKLVLV NPFHVKRSKE LDDNHPSKTD
AKDPKTIAKL VIEGRYNEPY IPEGLYAELR IAVTCRVRIQ KEMNSIKNRI QRWLKIYFPE
HETVFGKFDA TSSMLVLQVA PLPRDIERLG VEGINRIWRD NKLRAVGMKR AKSLYEAAQK
SIGCTEGESC SRMEIQLLLQ DYHTKTAQYQ AVTETIDGLC RQIPEVAKLL EIKGVGLVTV
AGFLSEVGDI KRFNSPKQIQ KLAGLALRES SSGKHKGQTT ISKRGRARLR AILFQAVMPL
VAKNAEFAEI HNYYTTRTQN PLKKKQSLIA LSCKLIRVFY AILTKGTDYD PKKLIMDIHR
PVEYLAA
|
|---|
| |