Gene Dhaf_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0953 
Symbol 
ID7257922 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1047909 
End bp1049089 
Gene Length1181 bp 
Protein Length393 aa 
Translation table11 
GC content44% 
IMG OID643560869 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_002457451 
Protein GI219667016 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAACG TGTCAAAAAA CGGGAAACGG TATAATCAAG AATTCAAACA TGACATTATA 
CGCTTAATCA CTGAAGAAAA CCGTTCAGTT TCAAGTGTGG TTCAAGATTT TGGGGTCAAT
GAGCAAACTG TGCGCAACTG GCTTAAGCAA ACCAAAGAGA GGCAAGATCC TATCAAGACC
AAGATAGCCG AGCTTGAAGC TGAGCTTAAA GCAAGGGATA AAAAGATTGC CGATCAGGAG
TTAACGATAG ATATCTTAAA AAAGGCTACC GCCATCTTCG CCCAAAGCAA CCGGAAATAA
TCTATCAGAT GATTAAAAAA GCCAGCAGCT CCAGCTGCCC GGTTGAGAAG ATGTGCGAAA
CCTTAGAGGT ATCTCGGAGC GGTTATTATG ATTGGGATAG GCGTGAACCC AGCAAGCGTC
AAAAAGAGAA CGAAACGATT CTTAAGGTGA TGAAGGAAAG CCATACCAAG GCTCAGGCAA
TGATTGGTCT GGATAAACTT TGGAGCGATG TCAAAGAGGC AGGGTTTCAA TGCGGTAGAA
ACCGGGTTTA CCGATTACAA AAGCAACATG GACTATACAG TGTTCGAAAG AAGCCCTATC
GCGTCTGTCT CACCGACTCG AATCATGATT TGCCCAAAGC CCCGAATCTC TTAAACCAAA
AATTTAAGGT TGAGCACCCG AATAAAGTCT GGGTCACGGA TATCACAGAA TTTAAAACAG
CTAAAGGAAG CAAGCTGTAT CTGGCTGCCA TCAAGGACTT ATTTCATAAA GAAATTGTGG
GTTGGGCTTT GGCTGAACAC ATGAGGACTG AGCTCTGTTT GGAAGCCTTA AGGAACGCTG
TCAAGCGTCA TAGACCGCTC AAAGGGTTGA TTCATCATTC GGATCAAGGG CGGCAATACT
GCAGCACCGT CTATGTCGAA GAATTAAAGC ACTGGGGAAT GATACGAAGT ATGAGCAGAA
AGGGCAACCC CTTTGATAAT GCCTGCGCAG AGTCTTTTTT CAGCACCATT AAATCAGAAA
GGCTCCATCA CAAAACATAC AAAGACATCG AGGAAGCAAG GCGGGATATC TTTTGGTACA
TCGAATGTTT TTATAATCGA CAACGGAGGC ATCAAGCGTT AGGGAATCTG ACACCGGCAG
CTTTTTTAAA GAAGCACTGT GAGACCCAAA AGGCTGCTTA G
 
Protein sequence
MINVSKNGKR YNQEFKHDII RLITEENRSV SSVVQDFGVN EQTVRNWLKQ TKERQDPIKT 
KIAELEAELK ARDKKIADQE LTIDILKKGY RHLRPKQPEI IYQMIKKASS SSCPVEKMCE
TLEVSRSGYY DWDRREPSKR QKENETILKV MKESHTKAQA MIGLDKLWSD VKEAGFQCGR
NRVYRLQKQH GLYSVRKKPY RVCLTDSNHD LPKAPNLLNQ KFKVEHPNKV WVTDITEFKT
AKGSKLYLAA IKDLFHKEIV GWALAEHMRT ELCLEALRNA VKRHRPLKGL IHHSDQGRQY
CSTVYVEELK HWGMIRSMSR KGNPFDNACA ESFFSTIKSE RLHHKTYKDI EEARRDIFWY
IECFYNRQRR HQALGNLTPA AFLKKHCETQ KAA