| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0924 |
|---|
| Symbol | |
|---|
| ID | 7257893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 1017296 |
|---|
| End bp | 1018879 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643560841 |
|---|
| Product | Alkaline phosphatase |
|---|
| Protein accession | YP_002457423 |
|---|
| Protein GI | 219666988 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1785] Alkaline phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000229427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAGA ATTTCAAAAT GTCCAAGCGC TTCCTGGCAT CATCGCTCTG TCTGGTCATG
GCCTTATCTC TGGCCACAGG TGCCGTACTC GATAGCAGGC CGGCATCAGT AGTGGCAGCA
CAGCCTGCCG CAACAGCCAA AGCCGAAGTA ACAGAAAAGA CCCCCAAGTA TATCTTTATG
TTCATCGGGG ATGGCATGGC AGCCGTACAA GTGAACTCAG CTCAAATTTA CGGCGGAACC
AATAAACATA ATCAAATGGC TTTAGACAAA ATGAACTTCC AGGATTTTGA GGCCGTTGGT
TATCAAACCA CTCAGGACGC CACATCCTTT GCACCGGACT CTGCATCCAC AGCAACTTCC
CTTTCCTCAG GATTTAAGAC CTGGAGCGGA ACCATTGGCC TAAAACCGGT GGGAAGTAAA
TCCGGAAACA AACCGGAAAA TGTGGAAGGT ACGATTCCCA AAACCATTGC CGAAAGACTT
AAGGCCGAAA AAGGAATGAA GATCGGCATC ATATCCACCG TAACCATCAA CCATGCCACA
CCGGCAGCTT ACTATGCCCA TGTCGCTTCC CGAAACGACT ATTATGACAT CGCTCTGCAA
ATGGCAAACT CCGGCTTCGA TTTCTTTGGC GGCGGAACCA TCAGCCAGCC TACAGGAAAA
GACAAAGATC AAAAAGATGC TTATGACGTT ATGAAAGAAA AGGGCTACAA AATAGCTAAG
ACAAAAGAAG ATATCCTGGC CCTTAACAGC CAATCAGGAA AAGCCTATGC AGTGACTCCG
GTTACTCAGG ACAGCGGCGC TATGCCCTAT GCCATAGATA ATAAAGATGG CGATTTAACT
CTGGCTGATT TCGTAAAAAA AGGCATCGAT GTTCTTGACA ACGACAAAGG ATTCTTCATG
ATGGCCGAAT CAGGCAAGAT TGACTGGGCA GGTCATGCTA ATGATGCCAA AGCCAATATT
GGTGATGTGA TCGCCTTTGA AGAAGCTATC CAAGTCGCCA TCGACTTTGC TGCCAAGCAC
CCTGAAGAGA CCCTGATCAT CGTTACCGGC GATCATGAAA CAGGCGGCAT GACCATCGGA
CAGGCAACAA CCGGTTATGA TACAGCTTTT CATATTTTAG AAAGCCAAAA GATATCTTAT
GTAGCCTTTG ACGCTTTAAT CAATAAGATG AAAGCAGACA ATCCGTCCCT AAAATTTGAC
GACGTTATGC CCGTTATCAC GGAAAGCTTC GGTCTTGTTA ACAAAACCAA AAATGATATA
AGCCGCCCCG GTGAGCCCAG CTATATGACC TTAGAATTAT CTGATCGGGA AGTAGCTAAG
CTAAAAAAGG CCTTTATGGA AACCATGAAA GACAAACCTA CCGACAGCGA AGAAAATGAT
CTATTATACG GCGGTTATAA TCCACTTTCC GTAACCTTAA CTCATATTCT TAATAACAAA
GCAGGTATCG GCTGGACCTC CTATTCCCAC ACAGGCGTAC CGGTTCCAGT CTATGCAACA
GGTGCCAGTG CCGAGCTGTT TAATGGTGCC TATGAAAATA CCGCTGTGTA CGACAAATTA
GTCAAGGCTA CAAATCTTAA CTAG
|
|---|
| Protein sequence | MFKNFKMSKR FLASSLCLVM ALSLATGAVL DSRPASVVAA QPAATAKAEV TEKTPKYIFM
FIGDGMAAVQ VNSAQIYGGT NKHNQMALDK MNFQDFEAVG YQTTQDATSF APDSASTATS
LSSGFKTWSG TIGLKPVGSK SGNKPENVEG TIPKTIAERL KAEKGMKIGI ISTVTINHAT
PAAYYAHVAS RNDYYDIALQ MANSGFDFFG GGTISQPTGK DKDQKDAYDV MKEKGYKIAK
TKEDILALNS QSGKAYAVTP VTQDSGAMPY AIDNKDGDLT LADFVKKGID VLDNDKGFFM
MAESGKIDWA GHANDAKANI GDVIAFEEAI QVAIDFAAKH PEETLIIVTG DHETGGMTIG
QATTGYDTAF HILESQKISY VAFDALINKM KADNPSLKFD DVMPVITESF GLVNKTKNDI
SRPGEPSYMT LELSDREVAK LKKAFMETMK DKPTDSEEND LLYGGYNPLS VTLTHILNNK
AGIGWTSYSH TGVPVPVYAT GASAELFNGA YENTAVYDKL VKATNLN
|
|---|
| |