Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0916 |
Symbol | |
ID | 7257885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 1007586 |
End bp | 1009385 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643560833 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_002457415 |
Protein GI | 219666980 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000947728 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAG TTTTTCTAAA AAAGTCAATT ATTCAATCGA CCTTATTCAG CATAACAATT AGCATATTTA TGATAACCAT GGTATTGATG TTGTTTTTTG GAAAGACCTT TTGGGAAAAA GAGTCTGTGA AACTGGAATA TGACTTATTG ACTATTGCTC TTGATGTAAA GCAGACTATT GATTCAAACC TGCATTTGAT TCCTTCCTGC CAAGATGATG TAAATATTCT GCCCAGAACT CAGCAAATGG TGAAACTTGA CAAAGTGGTA AAACCTTTGT TGCAGGAGAA ACGCCCCTAC TCCGTAGCTT TTTATGATTT GGAGTTTGGC TGGATGGTTT CTGAGGGAAA GCAAATAGAG TCTGTAGAGA CGATCCTGGT TGACCTTCAT GGTGCCTCAG AAATAAAGGT TCTCAATTAC GATCATATAA CCTTGGTAAG CGTTCCGGTA CAACTGGAAA AAGGCTTAAA GGGGTATGTG TGGGCTTATG CCACAAAATC CGAATTTGAA CTTGGTCCTT TTACGGGGTA TAGCATCTCT TTTAGTTTAT TGTTTTTATC CATAGGGATT ATTATCATCC TCATTCAAAA GTTTATGAAG GAGATCCAAC ATCAGTTGGA AGAATTCTCG GAATCCATCG TTCATCCTGA AACCAATCTG TCGTGGAACT CCCATGGGCT GCCAGAACTC GAGCCAGTTT TAGACAAGAT TAAGGGGTAT ACTCAAGAGC TGAGTGCTAT TAATGAAGAG CTTGAGGCTT CACAGCGGCG ATTTACCCAA ATCATGGAGG GGATCTCCGA TGGCTTATTT TCTATAGATA GAGAGTGGCG ACTCCTTTTC TACAATGATG TAGCGAAGAA GTATTTTGAT AAATCTGATG AAGAATTGAA AATGAAAAAT ATACTCGAAA TTTTTCCTAG TTTCTCTAAT ACAGTAACGT ATCAATATAT TGCGGAAGTT TTCCTTACTG CTGAACCTGC CTATTTCGAA GCGGATGGAA TGATGACCTC GGAGAGAATT TTCCATACCA GTATTTATCC TTTTGAAGAA GGGATTACGG TCTTCTTCAG GGATATAACA GAACAAAGGC AACAGCAGCA TGAAATGGCG CGACTGGAAA GGCTTAACCT GGTTGGCCAA ATGGCCGCCG GAATCAGCCA TGAGATAAGA AATCCCCTCA CTACCGTTAA GGGCTTCCTG CAGTTGCGCG GCATTAAGGT TACGGATCCT GATGAAAAAG AGTACAACGA CCTAATGATT TCGGAAATTG ATCGTGCCAA TACTATTATC TCCGAGTTTT TATCTTTGGC GAAAGACAAT ATGGGCAGCA CTCAGGAACA GGATATCAAT CAGATTATCT ATAGAATCTT CCCGATGATT CAGGCTGATG CCAATAACGG CAATAAAGAT CTCATATTAA ACTTAAATCC GTTACCCAGC CTATGGCTTA ATGAAAATGA AATACGCCAA CTGCTCTTGA ACTTTGTCCG CAATGCTCTG GAGGTCACTC CACAGGGTGG GTGTGTCATT ATACAGACTT ACGAGGATAG AAATAATGTG GTTTTGGCTG TCAAAGATCA AGGGTGCGGT ATTCCTGAGG AGATCCGGGA TAAGATTGGG ACACCGTTTT TTACAACCAA AGAGAGCGGA ACAGGATTGG GAATTGCGAT CTCCATGGGC ATAGCTCATC GTCACAATGC TGAACTGACG TTTGACACGG GAGATCAGGG GACTACCTTT AAAGTCATAT TTAAAAGAAG GAATATCCTC GGTAAAAAAG ATGAAGGTGA ATTAAGTTGA
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Protein sequence | MKKVFLKKSI IQSTLFSITI SIFMITMVLM LFFGKTFWEK ESVKLEYDLL TIALDVKQTI DSNLHLIPSC QDDVNILPRT QQMVKLDKVV KPLLQEKRPY SVAFYDLEFG WMVSEGKQIE SVETILVDLH GASEIKVLNY DHITLVSVPV QLEKGLKGYV WAYATKSEFE LGPFTGYSIS FSLLFLSIGI IIILIQKFMK EIQHQLEEFS ESIVHPETNL SWNSHGLPEL EPVLDKIKGY TQELSAINEE LEASQRRFTQ IMEGISDGLF SIDREWRLLF YNDVAKKYFD KSDEELKMKN ILEIFPSFSN TVTYQYIAEV FLTAEPAYFE ADGMMTSERI FHTSIYPFEE GITVFFRDIT EQRQQQHEMA RLERLNLVGQ MAAGISHEIR NPLTTVKGFL QLRGIKVTDP DEKEYNDLMI SEIDRANTII SEFLSLAKDN MGSTQEQDIN QIIYRIFPMI QADANNGNKD LILNLNPLPS LWLNENEIRQ LLLNFVRNAL EVTPQGGCVI IQTYEDRNNV VLAVKDQGCG IPEEIRDKIG TPFFTTKESG TGLGIAISMG IAHRHNAELT FDTGDQGTTF KVIFKRRNIL GKKDEGELS
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