| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0887 |
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| Symbol | |
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| ID | 7257856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 976793 |
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| End bp | 978493 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643560804 |
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| Product | Collagen triple helix repeat protein |
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| Protein accession | YP_002457386 |
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| Protein GI | 219666951 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAGT TAACCACCGG TTTGATAGAC AATTTTCCGG TTAATGGGGT GCGCCCCTCA
GTATCGGTAG CCATTAGAAT TACCAATGAT GGTGATTCAG TAGAGATGGT TGAAATAATA
GGCTATTATC TCAATGGCCT CTTCAAAGAG GTATATGTTT TAGAAGAGCT TAGCATTATT
CCCGGTGAGG TTGTGCTTAG GGAGTATTTT GCTGATTTAG ATGCCTTCGA ATTTGTATTC
TCCACAAGCT CCGAAACGGT AGTCATATCA GTTTGGGGTA AGGATGCTGA AGGAAATTTG
GTGGATGCTC ATCGGGTACT CCCGGCTGAG TTGGATTCAC TGGAACCGGT AATAGGACCA
ACCGGAGCCA CCGGTGCAAC GGGAGCCACA GGAGACACAG GAGCCACAGG AGCCACCGGT
GCAACGGGAG CCACAGGAGA CACAGGAGCC ACAGGAGCCA CCGGTGCAAC GGGAGCCACA
GGAGACACAG GAGCCACAGG AGCCACCGGT GCAACGGGAG CCACAGGAGA CACAGGAGCC
ACAGGAGCCA CCGGTGCAAC GGGAGCCACA GGAGACACAG GAGCCACAGG AGCCACCGGT
GCAACGGGAG CAACGGGAGC CACGGGGGCC ACCGGTGCAA CGGGAGCAAC GGGAGCCACG
GGAGCCACCG GTGCAACCGG AGCAACGGGA GCCACGGGAG ACACAGGGGC CACCGGCGCA
ACGGGAGCCA CGGGAGATAC AGGAGCAACG GGAGCCACGG GAGCCACCGG TGCAACCGGA
GCAACGGGAG CCACGGGAGA TACAGGAGCC ACCGGTGCAA CGGGAGCCAC AGGAGATACA
GGAGCCACCG GTGTAACGGG AGACACAGGA GCCACCGGTG CAACGGGAGC TACAGGAGAC
ACAGGAGCCA CCGGTGCAAC GGGAGCCACG GGAGACACAG GAGCCACCGG TGCAACGGGA
GCCACAGGAG ACACAGGAGC CACCGGTGCA ACGGGAGCTA CAGGAGACAC AGGAGCCACC
GGTGCAACGG GAGCTACAGG AGACACAGGA GCCACCGGTG CAACGGGAGC CACAGGAGAC
ACAGGAGACA CAGGAGCCAC CGGAGCAACG GGAGCCACGG GAGACACAGG AGCCACCGGT
GCAACGGGAG CTACAGGAGC AACCGGAGCC ACAGGTGAGA CCGGAGCAAC CGGGGCTACT
GGCGGCGGAG CCGTTATTCC GTTCTCATCA GGAGATCCCC TGGCAGTCAC CACTCTTGCG
GGTGGACTCG TAGGTCTGCC TGGATTGATC GGATTCGGGT CCTCCGCCCA AGCGTTGACG
GTTCTGGGTG CCACTATTGA TCTCAGCGGC CAGACCAATT ATGCATTTTC CATGCCACGG
GACGGCGTGA TCACGTCACT GGCCGCATAT CTCAGTGCAA CAGCTGCGCT GGCGTTGCTT
GCCCCTTTGA CCTACACCGT TCAGCTGTAC AGCTCACCGT CTCCGGATGA TGTTTTCAGC
CCCGTGCCAG GAGCTGTGGT CGACATTACA ATTACCGGTC CGATCGCCGT TGGGGATACC
TTTAATGGAA TTGCGACGGG TCTGAGCATC CCGGTCACCG GGCAAACGCG ACTGCTCCTC
GTGGTCAGCG CTACTGGAGG CGGACTTGTA GCAGGAGGAA CGGTTGCGGG ATATGTCAGC
GCGGGCCTTG GCATAGAATA A
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| Protein sequence | MAELTTGLID NFPVNGVRPS VSVAIRITND GDSVEMVEII GYYLNGLFKE VYVLEELSII
PGEVVLREYF ADLDAFEFVF STSSETVVIS VWGKDAEGNL VDAHRVLPAE LDSLEPVIGP
TGATGATGAT GDTGATGATG ATGATGDTGA TGATGATGAT GDTGATGATG ATGATGDTGA
TGATGATGAT GDTGATGATG ATGATGATGA TGATGATGAT GATGATGATG ATGDTGATGA
TGATGDTGAT GATGATGATG ATGATGDTGA TGATGATGDT GATGVTGDTG ATGATGATGD
TGATGATGAT GDTGATGATG ATGDTGATGA TGATGDTGAT GATGATGDTG ATGATGATGD
TGDTGATGAT GATGDTGATG ATGATGATGA TGETGATGAT GGGAVIPFSS GDPLAVTTLA
GGLVGLPGLI GFGSSAQALT VLGATIDLSG QTNYAFSMPR DGVITSLAAY LSATAALALL
APLTYTVQLY SSPSPDDVFS PVPGAVVDIT ITGPIAVGDT FNGIATGLSI PVTGQTRLLL
VVSATGGGLV AGGTVAGYVS AGLGIE
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