Gene Dhaf_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0879 
Symbol 
ID7257848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp968977 
End bp969741 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content49% 
IMG OID643560796 
ProductABC transporter related 
Protein accessionYP_002457378 
Protein GI219666943 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.124339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTACCT ACCGCAGTAA GATGGATAAG ATAAAGCTTG AGACGCAAAA TATCTCAAAG 
GGTTTTGCGG GAGAATTAAC GATTAAAGAC ATCAATATCA GGCTCGGTGA AAAGGAGCTG
GTAAGCCTCC TGGGAGTAAG CGGCATCGGC AAAAGCACTC TTTTTAATGT TATCGCCGGT
GTCCTTACCC CTGATTCAGG ACGAGTGCTT CTCAACGCTC AGGATATTAC GGGTCAGGCC
GGTAAAGTAA GCTATATGCA GCAAAAGGAC TTGATGCAGC CTCATTTGAC TGTGTTGGAT
AATGTGGCCC TCCCTCTTTT CATTCGGGGA GTAAAGAAGA GCCAAGCCCG TGAAGAGGCC
TTCAGCCATT TCAAGGAGTT CGGGTTGGAA GGGGCCGAGA AGAAGTACCC CGCCCAGCTT
TCCGGAGGAA TGCGGCAAAG AGCGGCCTTG CTCAGAACCT ATATGTTCTC TCGCGATGTA
GCTCTCTTTG ACGAACCTTT TTCCGCCCTG GATGCCATTA CTAAGAGCTC CATGCATCGC
TGGTATTTGG ATCTCATGGG CCGAATCGAC ATGTCTGCTT TATTCATTAC CCATGATATC
GATGAAGCCA TCCTGCTTTC CGACCGGGTG TACATTATGA CCGGGCCCCC AGGAAGGCTC
GCCCATGAGA TTATTATCGA TACCCTGCGG CCCCGGGGAG AAGAATTCCG GATATCTGAT
GCTTTTATGG GGTACAAGAG ACAGATCATT AAGTTATTAA GCTAA
 
Protein sequence
MPTYRSKMDK IKLETQNISK GFAGELTIKD INIRLGEKEL VSLLGVSGIG KSTLFNVIAG 
VLTPDSGRVL LNAQDITGQA GKVSYMQQKD LMQPHLTVLD NVALPLFIRG VKKSQAREEA
FSHFKEFGLE GAEKKYPAQL SGGMRQRAAL LRTYMFSRDV ALFDEPFSAL DAITKSSMHR
WYLDLMGRID MSALFITHDI DEAILLSDRV YIMTGPPGRL AHEIIIDTLR PRGEEFRISD
AFMGYKRQII KLLS