Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_0879 |
Symbol | |
ID | 7257848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 968977 |
End bp | 969741 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643560796 |
Product | ABC transporter related |
Protein accession | YP_002457378 |
Protein GI | 219666943 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.124339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTACCT ACCGCAGTAA GATGGATAAG ATAAAGCTTG AGACGCAAAA TATCTCAAAG GGTTTTGCGG GAGAATTAAC GATTAAAGAC ATCAATATCA GGCTCGGTGA AAAGGAGCTG GTAAGCCTCC TGGGAGTAAG CGGCATCGGC AAAAGCACTC TTTTTAATGT TATCGCCGGT GTCCTTACCC CTGATTCAGG ACGAGTGCTT CTCAACGCTC AGGATATTAC GGGTCAGGCC GGTAAAGTAA GCTATATGCA GCAAAAGGAC TTGATGCAGC CTCATTTGAC TGTGTTGGAT AATGTGGCCC TCCCTCTTTT CATTCGGGGA GTAAAGAAGA GCCAAGCCCG TGAAGAGGCC TTCAGCCATT TCAAGGAGTT CGGGTTGGAA GGGGCCGAGA AGAAGTACCC CGCCCAGCTT TCCGGAGGAA TGCGGCAAAG AGCGGCCTTG CTCAGAACCT ATATGTTCTC TCGCGATGTA GCTCTCTTTG ACGAACCTTT TTCCGCCCTG GATGCCATTA CTAAGAGCTC CATGCATCGC TGGTATTTGG ATCTCATGGG CCGAATCGAC ATGTCTGCTT TATTCATTAC CCATGATATC GATGAAGCCA TCCTGCTTTC CGACCGGGTG TACATTATGA CCGGGCCCCC AGGAAGGCTC GCCCATGAGA TTATTATCGA TACCCTGCGG CCCCGGGGAG AAGAATTCCG GATATCTGAT GCTTTTATGG GGTACAAGAG ACAGATCATT AAGTTATTAA GCTAA
|
Protein sequence | MPTYRSKMDK IKLETQNISK GFAGELTIKD INIRLGEKEL VSLLGVSGIG KSTLFNVIAG VLTPDSGRVL LNAQDITGQA GKVSYMQQKD LMQPHLTVLD NVALPLFIRG VKKSQAREEA FSHFKEFGLE GAEKKYPAQL SGGMRQRAAL LRTYMFSRDV ALFDEPFSAL DAITKSSMHR WYLDLMGRID MSALFITHDI DEAILLSDRV YIMTGPPGRL AHEIIIDTLR PRGEEFRISD AFMGYKRQII KLLS
|
| |