| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0868 |
|---|
| Symbol | |
|---|
| ID | 7257837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 960124 |
|---|
| End bp | 961182 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643560785 |
|---|
| Product | nitrite and sulphite reductase 4Fe-4S region |
|---|
| Protein accession | YP_002457367 |
|---|
| Protein GI | 219666932 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTAT CCATCAATGA AAGAGAAAAG ATGATAAAAA CCTGTGAAGA AATTATCGCT
CGTTGTGATA AACCCTTTGT TTGGGAAGAC GATGGGATCT ATGAATCAGA GCGAGCCAAA
AGTCCTTTTA ATCTTTTTTT GCCCCAAGAA CAAATAGTTC AGGAACTCAG TGCGCTGTTT
GAAACCTTTT GTGGTACTCC CTATATCTAC GATCAAATAA AAGCAGTCTG CCACTTGGAA
GCCGAATGGT ATGAGTATGG CACTTATGGC CTGGATCGCG ACTTCACTCG GGTCTTAAGC
CGTTACTCTC TAAAACCGGA ATATGTAGAA CAGGTAAAAG CACATTTTAC AAAGAGGCTC
AAAGAGTTGC TTCAAGAGCA GTCCGCCCTT TTAAAAGGTA AGGGGTTCCT TCTCAATAAA
GATGGGGTGC ATTTTTCTTG CAGGGTGGTT GTTCCCGGCG GGAAAATGAA TGCCCAGCAA
TCCAAAAGAG TAAGCGAAAT CTGTACACAG TATGGAAGCG GGTATTTTTA CCTCACCCAA
AGAGAAAATA TCGAAATCCC TGGTATTCTA TTAGATAACC TGAACGAGGT ATCTCAATCT
CTTGCTGAAG TCGGTTTGAG CATCGGTTCT ACAGGACCCA GGCCAAGACC CATAACAACT
TGTAAAGGGG CTGTGTGCAA ATTCAGTCTT TATGACACCG AGGGCTACAC CAGTCAACTC
AATGAAAAAA TTTATAAAGG TTATTATGAT GTGACCCTGC CCGGTAAGCT TAGAATTATT
ACCAGTGGCT GTTTTAATAA CTGTTCCATG CCTCATGTGG GCTGCATTGG CATCATTGGC
AAGAAAAAAG ACCAAGTCGC CATCAGTCTT GGAGGGATGG CCGCACGCAA GCAATTTTTA
GGCCAGGAAA TCCAAGGTCT TTATACTTTA GATGAGGCTA CCGGGATCAT TGAAAAAGCG
ATTCAATACT ACAAGGAGCA TGGCAATAAG GGCGAACGCT TTGCTCAAAT GATTGAGCGT
TTGGGCTTTG AAACTGTAGA GAAAGCCTTA ATTGGCTAA
|
|---|
| Protein sequence | MSLSINEREK MIKTCEEIIA RCDKPFVWED DGIYESERAK SPFNLFLPQE QIVQELSALF
ETFCGTPYIY DQIKAVCHLE AEWYEYGTYG LDRDFTRVLS RYSLKPEYVE QVKAHFTKRL
KELLQEQSAL LKGKGFLLNK DGVHFSCRVV VPGGKMNAQQ SKRVSEICTQ YGSGYFYLTQ
RENIEIPGIL LDNLNEVSQS LAEVGLSIGS TGPRPRPITT CKGAVCKFSL YDTEGYTSQL
NEKIYKGYYD VTLPGKLRII TSGCFNNCSM PHVGCIGIIG KKKDQVAISL GGMAARKQFL
GQEIQGLYTL DEATGIIEKA IQYYKEHGNK GERFAQMIER LGFETVEKAL IG
|
|---|
| |