| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0861 |
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| Symbol | |
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| ID | 7257830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 953536 |
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| End bp | 954903 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643560778 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_002457360 |
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| Protein GI | 219666925 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000302505 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAAA CACCTTACAA AATCTATCTC TCCGAAGAGG AAATGCCGAA AAGCTGGTAC
AACTTGAAGG CTGTAATGAA GGAACTCCCC CCTCCTATGC TTCACCCTGG AACGCTGAAG
CCCTGCACCA TCGAAGATCT GCAACCTGTG TTTTGTGATG AGTTAATCGA ACAGGAATTA
AACACCAAAG ATCTTTATAT TGAGATCCCT GAAGATATAC GGGACTTCTA TAAGATGTAC
CGTCCTTCAC CCCTGGTCAG AGCTTATTGC CTGGAAAAGC TGCTGGATAC TCCCGCGGAG
ATCTACTATA AATTTGAAGG AACCAATACC TCCGGCTCCC ACAAACTCAA CTCAGCTGCC
GCCCAGGTCT ACTATGCTAA AAAACAAGGT TTAACTTCCC TTACTACAGA AACCGGCGCT
GGGCAATGGG GTACGGCCCT ATCCATGGCC TGTGCCTATT ATCAAATTGA TCTCACCGTC
TATATGGTGA AGATCTCCTC TGAACAGAAG CCCTATCGCA AGGCTGTGAT TGAGACTTAT
GGTGGTAAGG TCATCCCCTC TCCCTCCGAC ACCACAGAAA TCGGAAAAAA AATCCTCGCC
GAAAATCCCG GCACCGGCGG CTCCCTGGGA TGCGCTATCT CCGAAGCCAT CGAAGTAGCT
CTAAAATCTG AGAATTGCCG CTATGTCCTG GGCAGTGTCC TTGATCATGT GGTTCTCCAC
CAAACAGTGA TCGGTGAAGA GACCAAGATT GCCTGCGAAA AGTACGGTAT TCAGCCCGAT
ATTATGATCG GCTGCGTAGG AGGCGGCTCC AACTATGCCG GCCTGATTGC CCCCTTCTTC
GGAGATAAAC TCCAAGGAAA AAATAACATT ACCTTTATCG GTGTAGAGCC TGCCTCTTGT
CCATCTTTAA CCCGGGGTAA ATATGCCTAT GATTTTGGCG ATACAGGAAA AACCACTCCA
CTTCTTAAAA TGTATACTTT GGGCTCAGGA TTCATTCCCT CCCCTAACCA TTCCGGTGGT
CTTCGCTACC ACGGCATGAG CGGCATAGTA TCCAAGCTCT ATCATGATGG CCTTATGGAA
GCCCGGGCGG TTGAGCAATC TAAGATCTTC GATGCTGCTA CTCTCTTTGC CCGCAGTGAA
GGAATTCTCC CTGCCCCTGA ATCCTCCCAC GCGCTGCGGG TAGCCATCGA TGAAGCCCTA
AAATGCAAAG AGACCGGAGA GAAGAAAACC ATTCTTTTCG GGCTTTCCGG CACCGGATAC
TTTGATCTGT CCGCTTATAT GAATTATAAC GCGGGCACCA TGACCGACTT TATCCCTACG
GATGAAGACT TAGAAAAGAG CTTTGCTACT TTGCCTAAAG TAGACTAA
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| Protein sequence | MTKTPYKIYL SEEEMPKSWY NLKAVMKELP PPMLHPGTLK PCTIEDLQPV FCDELIEQEL
NTKDLYIEIP EDIRDFYKMY RPSPLVRAYC LEKLLDTPAE IYYKFEGTNT SGSHKLNSAA
AQVYYAKKQG LTSLTTETGA GQWGTALSMA CAYYQIDLTV YMVKISSEQK PYRKAVIETY
GGKVIPSPSD TTEIGKKILA ENPGTGGSLG CAISEAIEVA LKSENCRYVL GSVLDHVVLH
QTVIGEETKI ACEKYGIQPD IMIGCVGGGS NYAGLIAPFF GDKLQGKNNI TFIGVEPASC
PSLTRGKYAY DFGDTGKTTP LLKMYTLGSG FIPSPNHSGG LRYHGMSGIV SKLYHDGLME
ARAVEQSKIF DAATLFARSE GILPAPESSH ALRVAIDEAL KCKETGEKKT ILFGLSGTGY
FDLSAYMNYN AGTMTDFIPT DEDLEKSFAT LPKVD
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