| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0838 |
|---|
| Symbol | |
|---|
| ID | 7257807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 933829 |
|---|
| End bp | 934746 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643560755 |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_002457337 |
|---|
| Protein GI | 219666902 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATTG ATCATGCAAT ACTAGGTATT CTGAGCTGGC AGCCATCTAC AGGATATGAA
CTAAAAAAGA TCTTTGAGGA ATCCTCTTTC ATGTACTGGT CCGGTAATAA TAATCAAATT
TATAAAGCTC TTATTAAAAT GCAAGAAGAG GAGCTCGTTA CCAATGAAGT GATCCATCAG
GAAAGCTCTC CTTCAAAAAA AGTGTATACC ATAACCGAAG AAGGTCTGAA AAAACTCAAA
ACATGGGTAC TGCACTCACC TGAAGTACCT GAGATAAAAA AAACTTTTTT AGTGCAGCTT
GCCTGGTCAG ACATATTAAA TGACCAGGAA ATAAATGAAT CTCTCTCAAG CTATGAAAAT
GAACTCAAAC TGCACTTAGC TCTGCAGCAG GAGAAAGCCA GACGTTCTCT TCACTCACCT
AATCGAACCT CTAGAGAAAG CTTAATTTGG GAGATGATTT CGGAGAACAT CATTTCAACT
TATAGTCACG AATTAAATTG GGTTCAAGAA ACCCGTCGGA AATTGCATGA ACATCAACTT
ATTGAGGAGA AAGAGAAAAT GAATTATCAA ATTAGAGAAA CAGAAAACAA AAAATACATC
GAATTGATTT CGATTGAGAA CCGATTAAAT ACAGAGAACG ATACTCTTGA CCTTATCTCT
TTATGTTGGG AGCATGAGTT GAGCAGGCTT ATGCTCCACT ATACAACCTT ATCCGAAGAC
TTCTTCGATC TTAAAACCGG AGTAGCAGGC GGTATTATTC AAAAGTTCAG TAACTATGGC
ATAAAAATTG TCCTTATTGT TCCCCAAGAG ACCATGCAGA AGGGCCGATT TAGAGAAATG
ACCGCGGAAA CCAATAAAGG TAACCACTTT AGAATGTATG AGAGTAAAGA AGAAGCCGAA
GCATGGCTTC TGGAATAG
|
|---|
| Protein sequence | MSIDHAILGI LSWQPSTGYE LKKIFEESSF MYWSGNNNQI YKALIKMQEE ELVTNEVIHQ
ESSPSKKVYT ITEEGLKKLK TWVLHSPEVP EIKKTFLVQL AWSDILNDQE INESLSSYEN
ELKLHLALQQ EKARRSLHSP NRTSRESLIW EMISENIIST YSHELNWVQE TRRKLHEHQL
IEEKEKMNYQ IRETENKKYI ELISIENRLN TENDTLDLIS LCWEHELSRL MLHYTTLSED
FFDLKTGVAG GIIQKFSNYG IKIVLIVPQE TMQKGRFREM TAETNKGNHF RMYESKEEAE
AWLLE
|
|---|
| |