Gene Dhaf_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0822 
Symbol 
ID7257791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp915045 
End bp915806 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content47% 
IMG OID643560739 
ProductN-acetylmuramoyl-L-alanine amidase family 2 
Protein accessionYP_002457321 
Protein GI219666886 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5632] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGAGC AAATCCTAGT CAATAATCGA CCTCAAGAGC CTCTGCAGCC TCAGGGTTTC 
GTGATTCACT CCACAGCGAC ACCTGGGGCT ACAGCCCAAA ATGAATTTAA CTATTTCAAC
AGTCAGCACC GGGCTGCTTC CGCTCATTAT TTCGTGGATT GGCTTGAGCT CATTCACGCT
ATTCCAGAAA ACGAAGTGGC CTGGCATGCT GGGTATACGG CCAACCATCG TTTTCTGTCC
GTGGAAATGA GCGAACCCCA GGGACATGAT CCGCAAAAGT TCCAGGAAGT CTGGAAACGA
ACCCTTTGGT TGGTAGCTGA CGCCTGTGTC CGCTACGGAT GGACGACACA CAATGTCTTC
TCTCATCGGG ATATATCTCT TACCTATGGA GAAACCAATC ACACGGACCC TATCGATTAT
CTGAAAAGCT ATGGTTATAC CTGGGAAGAC ATGATCATGG CCTTGGAGGG AGAAATCGAT
GGACTACAGA AAATCAATAT AGGGGGAGAT GGCAAAGTGG AGCATCTAAT CTTGGTAAGT
AGAGGAGCGG ATGAGAGAGC AGCAGGATAC CTGGCGGATT ATCTCCAGGC CCCCATTCTT
TACTTGGATC GCTTGAGTAA TGGGTACCTG GATTCAGCCA AAAAGATATA TGTGGTGGGT
GGAAATACTA AACCGGTGGA TAGAGCTATT TTGATTTCTG GAACTGATCG TTATGGAACT
TGCCAAAAAG TGCTGGATTT TATTCGGACC GGAAAGGTGT AA
 
Protein sequence
MKEQILVNNR PQEPLQPQGF VIHSTATPGA TAQNEFNYFN SQHRAASAHY FVDWLELIHA 
IPENEVAWHA GYTANHRFLS VEMSEPQGHD PQKFQEVWKR TLWLVADACV RYGWTTHNVF
SHRDISLTYG ETNHTDPIDY LKSYGYTWED MIMALEGEID GLQKINIGGD GKVEHLILVS
RGADERAAGY LADYLQAPIL YLDRLSNGYL DSAKKIYVVG GNTKPVDRAI LISGTDRYGT
CQKVLDFIRT GKV