| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0820 |
|---|
| Symbol | |
|---|
| ID | 7257789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 913240 |
|---|
| End bp | 914529 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643560737 |
|---|
| Product | Putative protein of poly-gamma-glutamate biosynthesis (capsule formation)-like protein |
|---|
| Protein accession | YP_002457319 |
|---|
| Protein GI | 219666884 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAT ATCCCTTTCC GAGAACTTAT TTTCCCTCCC TACTTTTACT CTTCCTACTT
ATCTCTCTAT CATCGGTCTT AACAGGCTGC CAGGGTCAAT CGATTCCTAT CGGAGCGACT
GAGCAAACGG GGCCAAATGA ACCGGTGCCG ACTCCTTTAC CTGAACCTGA ACTCATAGAC
CAAAAGGAGA CAATTACCCT GACCGCTTTG GGAGATATAC TCATGCACAA CACTCTGATT
TGGTCAGGGA GTCAACCGGA TGGCTCTTAC GCTTTTAATT TCTTTGGAGC GGTAGGAGAG
CTGATGGAGG AAGGGGATTA TTGTACCACC AACCTGGAGG CGGCACTTGC CGGTTCGGAG
GGAGGCTATA CCGGATATCC GTTATTCAAT AGTCCAGATG CGATCGCTGA CCACCTGAAA
GACTATGGAG TGGATGGGGT GATCACAGCC AATAATCATA TCCTTGATCG AGGATACCGG
GGGGCGGTCA GAACCGTAGA GGTGCTCGAA AAAGCAGGGC TGGACGTTTT AGGTGTTCGT
AAAAATCCGG GGGATTCCGG CTATCTCATT AAGGATATCC GCGGCGTCAA GGTGGGCTAC
CTAGCCTACA CCTATGGAAC TAACGGCTTA AGCCTCCCTT CTGAACATCA GTATTTTATT
AACATGCTGG AAAAAGAGCA GATTCTTCAA GATATTCGTC AATTGCGCAC TCAAGTGGAT
CTGCTAATCC TTGTACTTCA TTGGGGAGTG GAATACAGTA CAGAGCCCAC GAACGAACAA
CGGACTCTCG CCCGAGAATT TTTGGCAGCG GGTGCCGATG CTATCATAGG GAGCCACCCT
CACGTAATTC AACCGGTGGA ATACTTCAAT ATTGATGGCA AAGAGAAATT TGTGGCTTAT
TCCATCGGGA ACTTTATCGG GGATCAAAGA GGTCAGGAGC GCAACAGCGG TGTTATCCTT
CACTTAAAGT TCAACATTGA GAAAGTGATT CAACCCGGCA AGTTGGAGAG CTCTGCCTCA
AAAGGGATCT CGGATACTCT GATATCCCAA ACCACGGCAT TAAAGGGAGT CGAGCTAATC
CCTACCTATT CTCACAGCTA CACTAAGGGA GGCAGGCAGC AATTCCGCGT CGTCCCTGTA
GAAAAAACCA TCGAAAGAAT TAGGGCTGAT GAAGAGGAAG TCTTCTCCCG TGAGGATCTG
CCTCTTCTTG AAAATGTTTT GAAGACTACT GAGGAACGTC TGAATCAATT AACCTCGGAA
CGTAAGGAGC ATAAAGGACT GTCACAGTAA
|
|---|
| Protein sequence | MIKYPFPRTY FPSLLLLFLL ISLSSVLTGC QGQSIPIGAT EQTGPNEPVP TPLPEPELID
QKETITLTAL GDILMHNTLI WSGSQPDGSY AFNFFGAVGE LMEEGDYCTT NLEAALAGSE
GGYTGYPLFN SPDAIADHLK DYGVDGVITA NNHILDRGYR GAVRTVEVLE KAGLDVLGVR
KNPGDSGYLI KDIRGVKVGY LAYTYGTNGL SLPSEHQYFI NMLEKEQILQ DIRQLRTQVD
LLILVLHWGV EYSTEPTNEQ RTLAREFLAA GADAIIGSHP HVIQPVEYFN IDGKEKFVAY
SIGNFIGDQR GQERNSGVIL HLKFNIEKVI QPGKLESSAS KGISDTLISQ TTALKGVELI
PTYSHSYTKG GRQQFRVVPV EKTIERIRAD EEEVFSREDL PLLENVLKTT EERLNQLTSE
RKEHKGLSQ
|
|---|
| |