| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0759 |
|---|
| Symbol | |
|---|
| ID | 7257726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 843936 |
|---|
| End bp | 845165 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643560675 |
|---|
| Product | nuclease SbcCD, D subunit |
|---|
| Protein accession | YP_002457259 |
|---|
| Protein GI | 219666824 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0420] DNA repair exonuclease |
|---|
| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGGATTC TACATACTTC AGATTGGCAT TTAGGCAAGA ATTTAGAGGG TTTGAGCCGG
ATGGAGGAGC AGGAGCTTTT TCTGAAGGAT TTTATTGAGA TCGTCGAGGC GAAACAGGTG
GATTTGGTCA TGATCGCCGG AGATGTGTAT GACAGCCCCA ATCCTCCGGC TAAAGCGGAG
AAAATGTTTT ATGATACCTT GAAGAAATTA TCCGCCAATG GAGAGCGGCT CACCTTAGTC
ATCGCCGGAA ACCATGACAA CCCGGAACGC TTGGTGGCTG CAGGGCCTTT AGCCAGGGAT
CATGGAATTA TTATGGTGGG AACACCTAAG ACGATTGTGG CTCAAGGGGA GTATGGCAGG
CATCAGGTGA TCAATTCGGG TGAAGGCTTT GTGGAACTTG AGATCAACGG GGAAAAAGCC
GTGATCCTTA CCCTCCCTTA CCCCAGTGAA AAAAGACTCA ACGAAGTCTT ATATGATGCC
ATGGATGAAG AAGAGGAACG GCTCAAAATT TATGGGGATA AAATCAAAAT GCTCCTGGAT
AGCCTCAGTG AAAAATTTCG GGAAGATACA ATCAATATGG TAGTGTCCCA TCTTTTTGCC
GCAGGAAGCG AAGAATCAGG CTCAGAGCGA AGCATTCAAT TAGGGGGAAG CTTTATCGTG
GACGGCAGCT GCTTTCCCAA GGCAGCTCAA TATATTGCTC TAGGTCATAT ACATAAGCCG
CAAATCGTTC CGGGTACGGA CAAAAGAGCA CGCTATGCAG GCTCCCCCAT TCATTACAGC
AAAAAGGAGA TCCATTTCGC TAAGAAATGT TTCATTGTCG ATTTGAGGCC CCAACAAGAG
TACGCTCTTG AAGAGGTGGA TTTTAAAGTG TATAAACCGA TTGAAGTCTG GAAGTGCGGG
AGCATCGAGG CGGCTCTCCA GAAATGTGAA GAAAACAAAG ACAGGGAGTG TTGGGTGTAC
TTAGAAGTCA ATACGGATCG CTACATTCGG GAAGATGAGC TCAAACTCAT GAAAAGCACC
AAGAAAGACA TCCTGGAGAT AGTGCCGGTT TTGCCTGGAA GGGAAAGTGA GGAATGCACC
CTGAACAGCT TTGCCGAGCA GAAATTTGAG GATATCTTTA AAGAATTTTA TCGCAAAGAA
AGAACGGTAG AACCTCAGCA GGAGATTGTG GAGTTGCTGT TATCCATTAT TCAGGAGCAG
GAGGGAGAAG AAAGCCATGA GACCCATTAA
|
|---|
| Protein sequence | MRILHTSDWH LGKNLEGLSR MEEQELFLKD FIEIVEAKQV DLVMIAGDVY DSPNPPAKAE
KMFYDTLKKL SANGERLTLV IAGNHDNPER LVAAGPLARD HGIIMVGTPK TIVAQGEYGR
HQVINSGEGF VELEINGEKA VILTLPYPSE KRLNEVLYDA MDEEEERLKI YGDKIKMLLD
SLSEKFREDT INMVVSHLFA AGSEESGSER SIQLGGSFIV DGSCFPKAAQ YIALGHIHKP
QIVPGTDKRA RYAGSPIHYS KKEIHFAKKC FIVDLRPQQE YALEEVDFKV YKPIEVWKCG
SIEAALQKCE ENKDRECWVY LEVNTDRYIR EDELKLMKST KKDILEIVPV LPGRESEECT
LNSFAEQKFE DIFKEFYRKE RTVEPQQEIV ELLLSIIQEQ EGEESHETH
|
|---|
| |