| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_0744 |
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| Symbol | sdhA |
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| ID | 7257711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 829337 |
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| End bp | 831073 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643560660 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002457244 |
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| Protein GI | 219666809 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000832162 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGG TAATCGTGGT AGGCGGAGGA CTGGCGGGTC TGATGGCTGC CATTAAGATA
GCTGAGGAAG GAACACCGGT GGATTTATTC TCCTTGGTAC CGGTGAAACG CTCCCATTCC
GTATGTGCTC AGGGGGGAAT CAACGGAGCG GTCAACACAA AAGGTGAAGG GGATTCACCT
TGGGAGCATT TCGATGATTC GGTCTATGGA GGGGACTTTC TGGCCAACCA GCCCCCTGTG
AAGGCCATGT GTGATGCCGC GCCGGGTGTT ATCCATCTTA TGGATCGTAT GGGAGTTATG
TTTAACCGGA CAGCGGAAGG GTTTTTGGAT TTCCGGCGTT TCGGCGGGAC CAAGCATCAC
CGTACAGCCT TTGCCGGAGC CACCACAGGT CAGCAGCTTC TCTATGCCCT GGATGAGCAG
GTCCGCCGTT TTGAAGCGGC CGGGTTAGTC AGGAAATACG AAGGCTGGGA GATGCTCTCT
GCTGTTATTG ATGAAGGGGT CTGCAAGGGA ATTGTCGCCC AAAACCTCTA TAATATGGAG
ATCCAAAGCT TTCCCGCCGC TGCTGTCATC GTGGCCGCCG GGGGATGCGG CATGATCTTC
GGCAAGAGCA CCAATTCCAC CATTAACACA GGCTCCGTGG CCTCGGCTCT CTACCAGCAA
GGGGTCAAAT ACGCCAACGG TGAGTTTATC CAGATTCATC CTACGGCCAT TCCGGGGGAG
GATAAGCTGC GGCTTATGTC CGAGTCGGCC CGTGGCGAAG GCGGACGGGT CTGGACCTAT
AAAGAGGGTA AACCCTGGTA TTTTCTGGAG GAGATGTATC CGGCCTACGG GAACCTGGTC
CCCCGGGATA TTGCCACCCG GGCCATCTAC CATGTGGTCT TTGATTTGGG TCTGGGTGTC
AACGGTGAGA ACATGGTTTA TCTGGATCTT TCCCATAAAG ATTCCCATGA ACTTCAGATC
AAATTAGGAG GAATTCTTGA GATCTATGAG AAATTCGTGG GGGATGATCC CAAGAAGGTT
CCCATGCGGA TTTTCCCCGC AGTTCACTAT TCCATGGGCG GAATGTGGGT GGATTATGAT
CAAATGACCA ATATCCCCGG TCTGTTTGCT GCCGGGGAAT GTGAATATCA ATACCATGGG
GCCAATCGCT TAGGGGCCAA TTCCCTGCTC TCAGCTATTT ATGGCGGTAT GATCGCCGGC
CCTAAGTCCC TGGAGTACAT CAAGAAAAAT AAATCGGAAA CCTCCAGCGG GGAGGAAGAA
GTCTTTGTTC GTGAACGAAG GGCCCAGGAG GAGCTCTGGA ACAGGATTCT CACCATGAAG
GGTGAGGAGA ATCCCTACCA TATTTATAAA GAGCTGGGTG ATGTCATGAC CCAAAATGTC
ACTGTCATCC GCTATAATGA CAAACTGGCC GGAACGGACC AGAAGATCCA GGAGCTTATG
CAGCGTTGGC AGAAGATCCA GCTCATTGAT GATGTCCAGT GGAGCAACCA GACGGCACTC
TTTATCCGGC AGCTTTGGAA TATGCTGGAG CTGGCCCGCG TCATTACCTT GGGGGCCCTT
AACCGCAATG AAAGCCGGGG GGCCCATTAT AAGCCCGACT ATCCGGAGCG GGATGATGCG
AACTGGCTGA AGACCACCAT CGCCACCTAC ACACCCGAGG GCCCGCAGTT CAGCTATGAA
GCGGTGGATG TATCACTGAT CACGCCCAGA CCGCGGCGCT ATGATGTAGA GAAATAG
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| Protein sequence | MSKVIVVGGG LAGLMAAIKI AEEGTPVDLF SLVPVKRSHS VCAQGGINGA VNTKGEGDSP
WEHFDDSVYG GDFLANQPPV KAMCDAAPGV IHLMDRMGVM FNRTAEGFLD FRRFGGTKHH
RTAFAGATTG QQLLYALDEQ VRRFEAAGLV RKYEGWEMLS AVIDEGVCKG IVAQNLYNME
IQSFPAAAVI VAAGGCGMIF GKSTNSTINT GSVASALYQQ GVKYANGEFI QIHPTAIPGE
DKLRLMSESA RGEGGRVWTY KEGKPWYFLE EMYPAYGNLV PRDIATRAIY HVVFDLGLGV
NGENMVYLDL SHKDSHELQI KLGGILEIYE KFVGDDPKKV PMRIFPAVHY SMGGMWVDYD
QMTNIPGLFA AGECEYQYHG ANRLGANSLL SAIYGGMIAG PKSLEYIKKN KSETSSGEEE
VFVRERRAQE ELWNRILTMK GEENPYHIYK ELGDVMTQNV TVIRYNDKLA GTDQKIQELM
QRWQKIQLID DVQWSNQTAL FIRQLWNMLE LARVITLGAL NRNESRGAHY KPDYPERDDA
NWLKTTIATY TPEGPQFSYE AVDVSLITPR PRRYDVEK
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