Gene Dhaf_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_0687 
Symbol 
ID7257654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp774189 
End bp774875 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content36% 
IMG OID643560603 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002457187 
Protein GI219666752 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGAAA TTCTTAAAAA TTATATTTTT CCGGATACAT TTTATCCGGT GCCTAAATTT 
AAAGACTATA TCTATTTAGG CTCACAACGC AGTTACTGTA AGGGGGAAAC CGTCTTATTA
CCTGACGAAG TGCTGGGCAG AATTATTTTT GTGCTTTCCG GCAAACTCAA TGTCTCCAAG
ATCACCGAAG ACGGCAGAGA AAAATTTGTC TATTCTGCCG GGCAGTTTTG CTTTATGGAC
AGATTATTTA CATTTGAAAA TGACCATATG CAGATTGTGG CTATCGAAGA CAGTAAAGTC
TGCCTTTTCA GCAAAGAACA ACTTTTGGCA GCCTTTAAGC AAGATGAAGA ACTCATTATT
GATGTTTTAC GGCATTATGA TTCCAAGGTG TATTACTTTA TGAATCTAAA CAGTGAAATT
AATCTGTATT CCCCTTCGGT CAGGCTTTTG CGCTTATTTT ATGAACTGAG CCACTCCAAA
GGAGAATATG ACAAGGGAGT TTGGAAAGTT GAGATAGAAC TGACCAATAA AAAGATTTCG
GAAATCACCG GACTTCATTA TGTCACCGTA AGCAAGATAT TAGGAAGTCT CAAAAAGGCA
GGAATTCTTA AAAAAAGAAA AAGTAAAATT ATTATTTATG ATCTGGAAAA ACTAAAAGCT
CTTCTCGAAG AGGGGATAGC TTATTAA
 
Protein sequence
MGEILKNYIF PDTFYPVPKF KDYIYLGSQR SYCKGETVLL PDEVLGRIIF VLSGKLNVSK 
ITEDGREKFV YSAGQFCFMD RLFTFENDHM QIVAIEDSKV CLFSKEQLLA AFKQDEELII
DVLRHYDSKV YYFMNLNSEI NLYSPSVRLL RLFYELSHSK GEYDKGVWKV EIELTNKKIS
EITGLHYVTV SKILGSLKKA GILKKRKSKI IIYDLEKLKA LLEEGIAY